Arabidopsis lyrata (lyrate rockcress): 9328418
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Entry
9328418 CDS
T01578
Name
(RefSeq) ribosome biogenesis protein bms1
KO
K14569
ribosome biogenesis protein BMS1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
9328418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9328418
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
90S particles
GTPase
9328418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
GTP_EFTU
AAA_16
AAA_22
RNA_helicase
MMR_HSR1
AAA
NACHT
AAA_11
Motif
Other DBs
NCBI-GeneID:
9328418
NCBI-ProteinID:
XP_020868590
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MAADELMPSHRSHRTPKSGPTARKKSEQDKKKRGITVNKTPNFKAFGVKSARRAQRSKSR
AAEKDQKRLHLPKIDRTFGEAPPFVVVVQGPPGVGKSLVIKSLVKDFTKQNVPEVRGPIT
IVQGKHKRFQFVECPNEVNAMVDCAKVADLALLVVDGSYGFEMETFEFLNIMQVHGFPKV
MGVLTHLDKFNNVKKLRNTKHHLKHRFWTEIYSGAKLFYLSGLIHGKYSPREVHNLARFV
SIITPQPLTWRTSHPYVLADRLEDVTPPENVQMDKKCDRNITLYGYLRGCNFKKGMKVHI
AGVGDYSVAGVTALPDPCSLPSAGKRKGLRDRDKLFYAPMSGIGDLLYDKDAVYININDH
QVQYSKTDDGKGEPTNKGKGRDVGEDLVKSLQNTKYSVDEKLDKTFINIFGKKTSASSET
KLKAEDAYQSLPEGSDSESQSGDDEEDVVGNDSEIKQETEIHGGRLRRKAIFKQDLNEDD
FEEADDVELDSYDPNIYGFKEADDVESDKNEVEDGGDDFASDSPDDEAGDYQIDDKDFGN
ISKWKAPLKEKARKKNPNLMQIVYGASGSSATPLINENHDISDDEESDDEDFFKPKGEQS
KNLGGEWDVGYVNSEDCSKFVNYGYLKNWKEKEVCESIRDRFTTGDWSKAALRDKNLGTG
GEGEDDELYGDFEDLETGEKHKSHVNMESGANENEDEDAEVVERRLKKLARRAKFDAESN
KSELEEDDNDKGDGNNPRSQANEPGYVDKLKEELEIIKQRNELEYNDLDEETRIELAGFR
TGTYLRLEIHNVPYEMVEFFDPCHPILVGGIGFGEDNVGYMQARLKRHRWHKKVLKTRDP
IIVSIGWRRYQTMPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLVPPNTGFVAFQNLSN
NQAGFRITATSVVLEFNHQARIVKKIKMVGTPCKIKKKTAFIKDMFTSDLEIARFEGSSV
RTVSGIRGQVKKAGKNMLDNKAEEGIARCTFEDQIHMSDMVFLRAWTTVEVPQFYNPLTT
ALQPRDKTWNGMKTFVELRRELNIPVPVNKDSLYKPIERKPKKFYPLKIPKSLQKDLPFT
SKPKDIPKRKRASVDDKRAVIMEPKERKEHAIIQQFQLLQNYKMKKKKVTDQKKRKEYEA
EKAKNEEINKKRRREERRDRYREEDKQKKKTRRSQD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacgaactgatgccgtctcacaggtcacacaggactcccaaatcaggtcct
accgcgaggaagaaatctgaacaagataagaagaagcgtggaatcacggttaacaagacg
ccaaactttaaggcgtttggtgttaaatcggctcgcagggcgcagcgatcaaaatctcgc
gctgcggagaaggatcaaaaacgacttcatcttccgaaaattgaccgtacttttggcgaa
gctcctcctttcgtcgtcgtcgttcaaggccccccaggagttggaaagtctctcgtgatt
aagtctcttgtgaaggattttacaaaacagaatgtaccggaggttcgaggacctattacc
attgtacaaggtaaacataaaaggtttcaatttgtggagtgcccgaatgaggtcaatgcc
atggtggattgtgcaaaggttgctgatctagccctacttgttgtagacgggagttatggt
tttgagatggaaacctttgaattcctcaatattatgcaagtgcatggatttcctaaagtt
atgggtgtcctcactcaccttgataagttcaacaatgtaaagaagctgaggaatactaaa
caccatctcaagcatcggttttggaccgaaatatatagtggagctaaattgttctattta
tctggtctcattcatgggaagtattcgccacgtgaagttcacaacctcgcccgctttgta
tccattatcacacctcagcctttgacatggcgaacatcacatccatatgtgttggctgat
cgccttgaagatgttacccctcctgagaacgttcagatggataagaaatgtgatagaaat
atcactttgtatggttacctacgtggctgtaacttcaaaaaagggatgaaggttcatatt
gctggagttggcgactacagtgtagctggggtgactgctttacctgatccttgttcttta
ccttcagctggcaagagaaaagggctgagggacagggataagcttttctatgctcctatg
tccgggattggagatcttttatatgacaaagatgctgtttacatcaacataaatgatcac
caagttcagtactctaaaactgacgatggaaagggagaacctactaataaaggaaagggc
agagatgttggtgaagatttggtaaagtcgttgcagaacacaaagtattctgttgatgag
aaactggataagacattcattaacatttttggcaaaaagactagtgccagttcagaaaca
aaacttaaggctgaagatgcgtatcaatccttaccggaaggttctgacagtgagtctcaa
tctggcgatgatgaggaggatgtagtaggtaatgacagtgaaatcaagcaggaaactgag
attcatggtggaaggttgaggaggaaagctatcttcaagcaggacttaaatgaagatgat
tttgaggaagcagatgatgttgaattggactcatatgacccaaatatatacggttttaag
gaagcagacgatgttgaatcggacaaaaatgaagttgaagatggtggagatgactttgct
tccgattcgccagatgatgaggcaggggattatcagatagatgataaggactttggtaac
atatcaaaatggaaagcacccttgaaggagaaagccagaaagaagaaccccaacttgatg
cagattgtgtatggagcatcgggatcatcagctactcccttgataaatgagaaccatgac
attagtgatgatgaagaaagtgatgatgaagacttctttaagccaaaaggagaacaaagc
aagaatctgggtggtgaatgggatgtgggatatgtcaactcagaggattgttctaaattt
gtgaattatggttacctaaagaattggaaagagaaagaagtctgtgagagcattcgtgat
cgatttaccactggtgattggtcaaaagctgctctgagagacaaaaatttaggtactggc
ggtgagggagaagatgatgaactttatggtgattttgaggatctagagacgggagagaag
cataaaagccatgttaacatggaatcgggtgcaaatgaaaatgaagatgaagatgcagaa
gtcgttgagcgtaggctaaaaaagctggctcgtcgagcaaagtttgatgcagaaagcaat
aaatccgagttagaggaggatgacaatgataaaggtgatgggaacaatcctcgtagtcaa
gccaatgaacctggatacgttgataaattgaaggaagagcttgaaattataaaacagagg
aatgagttagaatacaatgatcttgacgaggaaactcgaattgagttagcgggattccgg
actggaacatacttgaggctggaaattcacaatgttccttatgagatggttgagttcttt
gatccttgtcatccaattctggttggaggtattggtttcggcgaggacaatgttggatat
atgcaggcccggttgaagagacataggtggcataagaaagtactaaagacaagagatcct
attattgtgtctatcggatggagacgctatcagactatgcctgtatatgccattgaagat
cgcaatggcaggcatcgaatgctcaagtatactccagaacacatgcactgccttgctacg
ttctggggtcctcttgtcccacccaacaccggctttgtcgctttccagaacctgtcaaac
aatcaggcaggatttaggataacagcgacatctgtagttcttgagtttaatcaccaggcc
cgtattgtaaagaaaatcaagatggttgggactccctgcaagatcaagaaaaagactgca
tttatcaaagacatgttcacttctgacctagaaatagctcgatttgaaggttcatctgtc
cggacagttagtggcattagaggacaagttaaaaaggctggaaaaaacatgcttgataac
aaggctgaagaagggatagcgaggtgtacctttgaagatcaaatccatatgagcgacatg
gtcttcttaagggcttggactacagtggaagttccacaattttacaatcctctaacgaca
gccttgcaaccccgtgataagacctggaatgggatgaaaacctttgtcgaactccgtaga
gagctgaatattcctgttccagtgaataaggattcactctacaagccaattgaaagaaag
ccaaagaagttctatccactaaagattccaaagagtctacaaaaagatttaccgtttaca
tcgaaacccaaagatataccaaagcggaaaagagcatcagtagatgataaaagagcagtt
ataatggaaccgaaagaaagaaaagagcatgctatcatccagcaattccagctgctgcaa
aattacaagatgaagaagaaaaaggtaacggatcagaagaagaggaaagagtatgaagca
gagaaagctaagaatgaggaaataaataagaaacggaggagagaggagagacgtgacaga
tatcgtgaggaagataaacaaaaaaagaagacgagaagaagccaagattaa
DBGET
integrated database retrieval system