KEGG   Arabidopsis lyrata (lyrate rockcress): 9328527
Entry
9328527           CDS       T01578                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X2
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aly01009]
    9328527
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aly03036]
    9328527
Enzymes [BR:aly01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     9328527
Protein phosphatases and associated proteins [BR:aly01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     9328527
Chromosome and associated proteins [BR:aly03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    9328527
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 9328527
NCBI-ProteinID: XP_002889706
UniProt: D7KIT8
LinkDB
Position
Unknown
AA seq 1209 aa
MGTELMRICVKEDSDDLPSVPPGFESYATFTLKRVVPGTSDKAKTAAIESVSATEQAKME
VESDEAKAARAVRRRPWINHSGCDDDDDDGAKIDNAASQNPDQSCAVKLSLPKGVVRGCE
ECKDCQKVTARWHPDEARRPDLEDAPVFYPTEEEFEDTLSYIAKIRPEAEKYGICRIVPP
PSWKPPCPLKEKQVWEGSKFTTRVQRVDKLQNRSSMKKISKLSNQMRKKKRKCMKMGMDS
VTNGVSDPCSVSTGMSELETFGFEPGPGFTLKDFQKYADEFKAQYFKKSETSTDDKCKVD
ISIDCWEPALEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKTSSSHNASSSEEK
YAKSGWNLNNFPRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHW
GAPKLWYGVGGKDAVKLEEAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCVQ
HAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLL
LGAAREVVKADWELNLLKKDTVDNLRWKAFSGKDGILAKTLKARIDMERTRREFLCNSSL
ALKMHSNFDATNERECCICFFDLHLSAAGCRCSPEKYSCLTHVKQLCSCPWVTKYFLFRY
DIDELNVLVEAVEGKLSSVYRWARQDLGLALSAQVSGSKMEIDEEEKVHKDLSPQVAALS
GKDLQLKITSREDLSKELEKTSKLSDINLLLKDKEEQLTSSHCMKPVKEETVYDSSDPNV
SGCQPSEEGIISVTAAKSASGKKNSQSLPNDVILLSDDEHDIPRKRGSVRRDAISSGKQL
EVRDRPTHVLALEASVKIAAPICQRKGDSLRDTRTTISLPTNDQRKMSRDVPSSISHAEV
KAEAAGLAQDICNRMDTNSHGGGKPTSCKSKNSGGVAIVDVVDGTRSNSGTPSCSQNNSP
DKFIRQKGPRIAKVVRRINCNVEPLSYGCVLSGKSWCNRRAIFPKGFRSRVRYMNILDPT
NMCFYISEILDAGRNSPLFMVYLESNPGEVFVHLSPTRCWEMVKDRVNQEISKQHKAGKS
DLPPLQPSGSPDGFEMFGYSSPAIVQAIEALDVTRVCTDYWDSRPYSRPQVQFPANPLLR
EANTSVRSDVAKLQLNPGHHSLPTGINSILKVLFKKANLEELSSLQQVLSETNSNLVTEI
VKEEIQNRR
NT seq 3630 nt   +upstreamnt  +downstreamnt
atggggacagagctaatgagaatctgtgtgaaagaagatagtgatgatttgccatctgtt
cctcctgggtttgaatcttatgctacttttaccttaaaaagagtagtccccggtacttct
gataaagccaagactgctgcaattgaaagtgtttctgcaaccgaacaagctaagatggaa
gttgaatccgatgaagccaaagctgctcgggctgtacgccgtaggccttggattaatcat
agcggatgtgatgatgatgatgatgatggtgcaaaaattgacaatgctgcatctcaaaat
cctgatcagagttgtgctgtgaagctgtctcttccaaagggtgtggtcaggggatgtgaa
gaatgtaaagattgccagaaggtaactgcgagatggcatccagatgaagctcgtaggcct
gaccttgaagacgcccctgtattctacccgaccgaagaggagtttgaagacactttgagt
tatatagctaaaataagaccggaggctgaaaagtatggaatctgtcgcattgttcctcct
ccttcctggaaaccgccgtgcccactgaaagaaaagcaagtatgggagggttctaaattt
acgacgcgtgtccaaagagttgataaacttcagaatcgtagttcaatgaagaagatttca
aagctttctaatcaaatgagaaagaagaaaagaaagtgcatgaaaatgggaatggattct
gtcaccaatggcgtgagcgatccctgttctgtaagcactggaatgagtgaacttgagacg
tttgggtttgaacctggtccagggtttacactaaaagacttccaaaaatatgctgatgag
ttcaaggctcagtactttaaaaagagtgaaacttctacagacgataaatgtaaagttgat
atttcaatagactgctgggagccagcacttgaggatgttgaaggtgaatattggcgtata
gtagataaagcaactgaagagatagaggtgctttatggtgctgatcttgaaactggtgta
tttggtagcggattccccaagacatcatcaagtcacaatgcttcttcttccgaagaaaaa
tatgcaaaatcaggctggaacttaaacaactttccaaggcttccgggatccctccttaag
tatgagggcagtgatatttccggtgtccttgtgccatggctgtatattgggatgtgcttt
tcttctttctgttggcatgttgaagatcaccacttgtattcgttgaattatatgcactgg
ggtgcaccaaaattgtggtatggtgttggggggaaggatgctgttaaactcgaggaggcg
atgagaaagcatttgcctgacctttttgaagaacagcctgacttacttcataagctagtt
acacaactctccccgtcaaaactgaaaaccgcaggagtacctgtgcaccgttgcgtccag
catgctggagagtttgtcttgacttttcctcgggcatatcatgctggatttaattctggt
ttcaattgtgctgaagctgtgaatgtagcaccagttgactggttgcctcatgggcagatt
gccatagagttatactgtcaacagggtagaaaaacgtccatctcgcatgataaattgttg
cttggggcagcaagagaagttgtgaaagccgactgggagctgaacttactaaagaaagat
actgtagataacttaaggtggaaagcattcagtggaaaggatggaattttggcaaaaaca
ctaaaggcacgcattgacatggaacgtacaagaagagaatttctgtgcaactcttcactt
gcattaaagatgcacagtaatttcgatgctaccaacgagagagagtgctgtatatgcttc
tttgatttgcacctgtctgctgctggttgccgttgttccccagagaagtattcatgtttg
actcatgtgaagcagttgtgttcatgtccatgggttactaaatattttctatttcgctat
gatatcgatgaactgaatgttcttgttgaggcagtggaaggaaaactgagttctgtatat
agatgggcgcgtcaagatttaggattggcattaagtgcacaggtctcaggaagcaagatg
gagatagatgaggaagaaaaagtccacaaggacctgagtccacaagtagctgcactttca
gggaaagatttgcagttgaaaataacatcgagagaagatctaagtaaagagttagaaaag
actagtaaattatcagatattaatttacttctgaaagacaaggaggagcaattaacgtca
agtcactgtatgaagcctgtcaaagaagaaactgtttatgattcttctgatccaaacgtt
tcaggttgccaaccatctgaagaaggcataatctctgtgacagctgctaagtctgcaagt
ggtaaaaagaattcacagagtctacccaatgatgtgatactcctcagtgatgatgagcat
gacatacctaggaaacgaggttctgtgagaagagatgcaatttcttctggcaagcaatta
gaagtacgagacagaccaacccacgttttagcgttagaagcttctgttaaaattgctgct
ccaatttgtcaaaggaaaggagattcactgcgtgatacacgaaccactatatcattgcct
actaatgaccaaagaaaaatgagtagggatgtaccgagttctatatcgcacgcggaagtt
aaggctgaggctgctgggcttgctcaggatatatgtaatagaatggacactaacagccac
ggtggtggaaaacctactagttgtaaatccaaaaactctggaggtgtggctatagtggat
gttgttgatgggacaagaagtaattcaggtacaccgtcttgctcgcaaaataatagtcct
gataagttcatccgccaaaagggtccccgtattgcaaaggtcgtgaggagaatcaattgc
aatgtagagcctttaagttatggatgtgtgctttctggaaaatcatggtgcaaccggcga
gcaatttttcctaaaggatttcgtagccgggttaggtacatgaacattttggatccaaca
aatatgtgcttctacatttcagaaattctggatgctggacgcaacagtccattgttcatg
gtttacttggagagtaatcccggtgaggttttcgttcatttgtcacctacaagatgctgg
gagatggtaaaagatagagtaaatcaagagataagtaagcagcacaaagctggaaaatca
gatcttcctcctttgcaaccctctgggagtcctgacggttttgaaatgtttggatattcg
tcacccgcaatagttcaggctatcgaagcattagacgtgactcgagtttgcacagactat
tgggattccaggccttattcgcggccacaagttcagttccctgcaaatcctcttctcaga
gaagccaacacaagtgtcagatcggatgtggcaaaactccagctaaaccctggacaccat
tcattgcctactggaataaactctattctcaaagttctgttcaagaaagctaatctggag
gaactaagctcacttcaacaggttttaagtgagactaactcaaatttggtgaccgaaatt
gtgaaggaagagatccagaaccgtcgctga

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