Arabidopsis lyrata (lyrate rockcress): 9328532
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Entry
9328532 CDS
T01578
Name
(RefSeq) presenilin-like protein At1g08700
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9328532
Peptidases and inhibitors [BR:
aly01002
]
Aspartic peptidases
Family A22: presenilin family
9328532
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
DUF6040
Motif
Other DBs
NCBI-GeneID:
9328532
NCBI-ProteinID:
XP_020869693
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MESSILDSLGVEIIGVMAPVSICMFLVVLLTYSLSVTSDPQIRTAANLIYIENPSDSATV
KLEGSLANAIVFVVLVAAVTFILVLLFYYNFTNFLKHYMRFSAFFVLGTMGGAIFLSIIQ
HFSIPVDSITCFILLFNFTILGTLSVFAGGIPIVLRQCYMVVMGIVVAAWFTKLPEWTTW
FVLVALALYDLVAVLAPGGPLKLLVELASSRDEELPAMVYEARPTVSSGNQGRNRGSSLR
ALVGGGGVSDSGSVELQAVRNHDGNQLGRENTHNLDYNAVAVRDIDNVDGNGNGNRGGVE
RSPLVGSPGEGHFASAISSEHSTRVGTRGNIDDRESAIDEEMSPLVELMGWGDNREEARG
LEESDNVVDSSNRGIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSV
YNRALPALPISIMLGVVFYFLTRLLMEPFVVGVTTNLMMF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagtctagtattctcgattctctcggagttgagataatcggcgtgatggctcctgtc
tccatttgcatgttcctcgtcgtccttctcacctactctctctctgtcacttccgaccct
cagatccgtaccgccgctaacctcatttacatcgagaatccctccgactccgccaccgtc
aagctcgaaggtagcctcgccaacgccatcgtctttgtcgtcctcgttgccgccgtcact
ttcatccttgttctcctcttctactacaatttcaccaatttcctcaagcattacatgcgc
ttctccgccttcttcgtcttaggtacgatgggaggtgcaattttcctgtcgattatccag
catttctcgattcctgtagattccatcacctgctttatattgcttttcaatttcaccatc
ttggggactttgtcagtgtttgctggtggaattccaattgttctgagacagtgttatatg
gttgttatggggatagttgttgcagcttggttcactaagttacctgaatggactacatgg
tttgtcttggtggctttagctttgtatgacttggttgctgttttggcacctggtggacca
cttaagctgttggtggagctggcttccagccgcgatgaggaacttcctgctatggtttat
gaagctaggccgactgtctcctcaggcaaccaagggagaaaccgtggctcgagtttaagg
gctttggttggcggtggtggagtttcagattctggatcagtagagctccaagcagttcgg
aatcatgatggaaaccaacttggaagggaaaatactcataatctggattataatgctgtt
gcagtgagggatatagacaatgtagatggtaatggtaatggaaacagaggtggtgttgag
aggtcacctctggttggaagtcccggggaaggacattttgcatctgccatatcctcagag
cactcaacccgagttggaaccagaggaaatatcgatgacagagaatctgctatagatgaa
gaaatgtctcctcttgttgagttgatgggctggggagataatagggaagaagctagaggt
ttggaggagtcagataacgttgtcgacagttcaaatagaggcataaaacttggtcttgga
gactttattttctacagtgttctagttggtagggcagcaatgtatgatctgatgacggtt
tatgcctgttatcttgcgatcatctcgggacttgggtgcactcttatattgttgtccgta
tacaaccgagctctgccagcccttcccatatctatcatgttaggtgttgttttctacttc
ttgacgcgattattgatggagccgtttgttgttggggtgacaacaaatttgatgatgttc
tga
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