Arabidopsis lyrata (lyrate rockcress): 9328613
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Entry
9328613 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aly03000
]
9328613
04121 Ubiquitin system [BR:
aly04121
]
9328613
Transcription factors [BR:
aly03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
9328613
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
9328613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
R3H
Motif
Other DBs
NCBI-GeneID:
9328613
NCBI-ProteinID:
XP_020868765
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MSFQVRRDRTDDRSRFNPQQTWIPRNASTSSVVVNEPLLPPNESLDAASRPLYLQRQHNV
SGPPPYNHHQRSNNNIGPPPPNRHRRNNAPDNHHQRSDNNLGPPPPNRQRRNNASGTLPD
NHQRVASRTRPVNQGKRVANEENIVLTDPNLPQLVQELQEKLVKSSIECMICYDKVGRSA
NIWSCSSCYSIFHINCIKRWARAPTSIDLLAEKNQGDNWRCPGCQSVQLTSSKEISYQCF
CGKRRDPPSDPYLTPHSCGEPCGKPLEKELAAAGTTKEDLCPHACVLQCHPGPCPPCKAF
APPRSCPCGKKMVTTRCSERRSDLICGQRCDKLLNCGRHQCVRTCHVGPCDPCQVLVNAT
CFCKKKVETVICGDMNVKGELKAEDGVYSCSFNCGKPLGCGNHFCSEVCHPGPCGDCDLL
PSRVKTCYCGKTRLEDQIRRSCLDPIPSCSNVCRKLLPCRLHTCNEMCHAGDCPPCLVQV
NQKCRCGSTSRAVECYITTSSETEKFVCAKPCGRKKNCGRHRCSERCCPLLNGKKNDLSG
DWDPHVCQIPCQKKLRCGQHSCESLCHSGHCPPCLEMIFTDLTCACGRTSIPPPLPCGTP
VPSCQLPCSIPQPCGHSDTHGCHFGDCPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKI
CGKTRRCGMHACARTCHPEPCDSFNESEAGMRVTCRQKCGAPRRDCRHTCAALCHPSAPC
PDLRCEFSVTITCSCGRITATVPCDAGGRSANGSNVYSAAYDEASVLQKLPAPLQPVESS
GNRIPLGQRKLSCDDECAKLERKRVLQDAFDITPPNLEALHFSENSAMTEIISDLYRRDP
KWVLAVEERCKFLVLGKARGSTSALKVHVFCPMQKDKRDTVRLIAERWKLGVSNAGWEPK
RFTVVHVTPKSKPPTRIIGARGGAISIGGPHPPFFDPLVDMDPGLVVSLLDLPREANISA
LVLRFGGECELVWLNDKNALAVFHDHARAATAMRRLEHGSVYHGAVVVQNDGQSPSLNNA
WGKLPGGSAWDVHKGNPWRKAVIQESDDSWGAEDSPIGGSSTDIQASAQRSAKSNTPIVT
SVNRWSVLEPEKASTSTLEPIAQIEESSSSKSTGKQPVGGSGEEVVDDWEKIVQTYITET
VCVCVCECCDESISELR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaagtcaggagagataggaccgatgataggtctcgattcaaccctcagcaa
acgtggattcctagaaacgcatctacctcgagcgtggtggtaaatgagcctttgcttcct
cctaatgaaagccttgatgctgcatcccgtcctctttatctgcaaaggcagcataacgtt
tctggtcctccgccctataaccaccaccaaaggagtaataacaacattggtccacctcca
cctaatcgacatagaagaaataatgcgcctgataaccaccaccaaaggagtgataacaac
cttggtccacctccacctaatcgtcaaagaaggaataatgcttctggaactctgcctgat
aatcaccaaagagttgcatctaggacgcggcctgtgaatcaggggaaaagggtagctaac
gaggagaatattgtgttgacagacccaaacttgcctcaacttgttcaagagttacaggag
aagctggtgaagagttccattgagtgtatgatttgttatgacaaggttgggcgctctgcc
aatatctggtcatgttccagctgttattccatcttccatatcaactgtatcaagaggtgg
gctcgagcaccaacttcaattgatttgctagctgagaaaaaccaaggtgataactggaga
tgtccaggttgccaatctgtacagttgacatcttctaaagagatttcctatcagtgcttt
tgtggaaagagaagagatccaccgtctgatccttatctcactccacactcatgtggggaa
ccatgcgggaaaccgctggagaaagagcttgcagcagctgggacgactaaagaggatctt
tgtcctcatgcatgtgtgttgcagtgtcatcctggtccatgtcctccctgtaaggcgttt
gctccacctcgtagctgtccttgtggtaagaagatggttactactagatgctccgagcgg
agatctgatcttatttgtgggcagcgttgcgataagcttctcaattgcgggcgtcatcaa
tgtgtaaggacttgtcatgttggcccttgtgatccttgtcaggtactggttaatgccaca
tgtttctgcaagaaaaaagtggagactgtcatttgcggtgatatgaatgtgaagggggaa
ttgaaagcagaagatggtgtgtattcgtgcagttttaactgtgggaagcctcttggatgt
ggtaatcatttctgttccgaggtctgccatccgggaccttgcggagactgtgacttactg
cccagtagagttaagacatgctattgtgggaaaacacgtttagaagatcagatcaggcgg
agttgcttggacccaattccttcttgttcaaatgtatgtaggaagcttcttccttgtagg
ttacatacttgcaatgagatgtgccatgcaggtgattgcccgccttgtttggtccaagtt
aaccagaaatgccggtgtgggtcaacatcaagggctgtggaatgctacataacaacttca
tcagagacagagaagtttgtgtgcgctaagccatgtggacgtaagaagaactgtgggaga
catagatgtagtgagcgttgctgtcctctcttgaacgggaagaaaaatgatctatctggc
gattgggacccacacgtctgccaaataccttgtcagaagaagctgaggtgtgggcagcat
tcctgtgaatctttatgtcacagtggacattgccctccttgtctagagatgatcttcact
gatcttacatgtgcttgtggaagaacttcgattcctccaccactaccatgtgggacacct
gttcctagctgtcagcttccatgctcgattcctcagccttgtggccattctgatacgcat
ggatgccattttggagattgtcctccttgttctgcccctgtggaaaagaagtgcgttggt
ggtcatgtggttctcagaaacataccttgtgggttgaaagacattagatgtaacaagatt
tgtgggaagacgaggcgttgtggcatgcatgcttgtgccagaacttgtcaccctgagcct
tgtgacagcttcaatgaatctgaagcaggtatgcgtgttacgtgtaggcagaagtgtggt
gctcctagaagagattgcagacacacttgtgcagcactctgccatccttccgcgccttgc
cctgacctaagatgtgaattttcagtcacaattacttgttcatgtggtcgcataaccgct
acggttccttgtgatgctggaggaagaagtgccaacggttctaatgtttactctgcggcc
tatgatgaagcctctgttttacagaagcttccagccccacttcagcctgttgagtcgagc
ggaaaccgaatccctctcggacagagaaagctttcgtgtgatgatgagtgtgcgaagctg
gagcgtaagcgggttcttcaagatgcatttgatatcactcctccaaatctggaggcatta
catttcagcgagaattctgctatgacagagattatttcagacctttataggcgtgatcca
aagtgggtactggctgttgaagagcgctgcaagttcttggtacttgggaaagcaagagga
agcacaagtgcccttaaggtccatgtcttctgccctatgcagaaggataaacgagacacg
gttcggcttatagctgagaggtggaaacttggtgttagcaatgcagggtgggagccaaaa
cggtttacagtggttcacgtaacaccaaaatcaaaaccgccaacacggatcattggagct
aggggtggtgctatctcgataggagggccacacccaccattctttgatccgctggtggat
atggatccgggacttgtggtttctttactggatcttccgagagaggcgaatatcagcgcc
ttggtactgagatttgggggtgaatgtgagcttgtttggctgaatgacaagaatgcgtta
gccgtgttccacgaccatgcccgagcggccactgccatgaggaggcttgagcacggttca
gtataccatggagctgtggttgtccaaaacgacgggcaatctccatcacttaataatgca
tggggaaaattacctggcggatcggcgtgggatgttcacaaaggaaatccatggaggaaa
gctgtgattcaggagagtgatgactcctggggagctgaagattcccccattggaggatca
tctacagatattcaagcctctgcacagagatcagcaaagagcaacactccaatcgttacc
tcggttaaccgttggagtgttttggagcccgagaaggccagcacatccactttagagcca
attgctcagatagaagagagcagcagttcaaaaagtaccggtaaacaaccggtgggaggc
tctggtgaagaagtggtggatgactgggagaagattgttcagacgtatataacggagact
gtatgcgtctgcgtgtgcgaatgctgtgatgagtccatttcagagcttaggtga
DBGET
integrated database retrieval system
