Arabidopsis lyrata (lyrate rockcress): 9328665
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Entry
9328665 CDS
T01578
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00450
Selenocompound metabolism
aly00970
Aminoacyl-tRNA biosynthesis
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
9328665
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
9328665
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aly01007
]
9328665
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9328665
Enzymes [BR:
aly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
9328665
Amino acid related enzymes [BR:
aly01007
]
Aminoacyl-tRNA synthetase
Class I (U)
9328665
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
9328665
Prokaryotic type
Other AARSs
9328665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
C1_1
Motif
Other DBs
NCBI-GeneID:
9328665
NCBI-ProteinID:
XP_002892603
UniProt:
D7KLJ9
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MDDDDPKLPISGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYICG
TDEYGTATETKALEENRTPREICDKYHAIHKEVYDWFDISFDQFGRTSTPQHTQVCQEIF
NKLWENKLISENTIQQLYCDTCNKFLADRLVEGSCPLCNYDSARGDQCESCGKLLNPTEL
IAPRCKVCQTTPEIRDTDHLFIDLPKLKAQLEAYINGTSVRGSWSRNAVQTTNAWIREGL
QQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEQWWKNPKNAELYQ
FMGKDNVPFHTVMFPSTQLGTGENWTLMKTVSVTEYLTYQGGKFSKSKGVGLFGNDVKDT
NIPVEVWRYYLLINRPEVSDTSFEWEDLQAKLNDELLKNLGNFVNRVVSFIAKPENIGYG
SIIPDAPGAESHQLTMSLSEKVGKLVEEYVEAMEKVKLKQGLKTAMLISGEGNAYLQTSE
FWKLYKEDKPSCAIVVRSAAGLVHLLARLLEPFMPSFSHEVFKQLNLPPHFSLSDERAEV
LQASRPWEILPPSHRIGTPQPLFKELKDEEVQQYKARFAGSQV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgatgatcccaagttgccgatctctggcaaaagaaatatactaatcacaagt
gctctgccttacgtcaacaacgtccctcatctcggaaacatcattggatgtgttctaagc
gctgatgtgtatgctagatactgtcgtctccgtggctataatgccatatatatatgtggg
actgatgaatatgggactgctactgagaccaaagctcttgaggagaatcgcaccccaaga
gaaatctgtgacaagtaccatgccattcataaagaagtttatgactggtttgatattagt
tttgaccagtttggccgaacttcaactccacaacatacacaagtgtgccaagaaattttc
aacaaattgtgggaaaacaagttgatttcagagaacactatacagcagctttactgcgat
acatgcaacaagttcttagctgaccggcttgttgagggttcctgtccactatgtaactat
gactctgctcgtggagatcagtgcgaaagctgtggaaagctcctgaatcctactgaactc
attgctccgaggtgcaaggtctgtcaaaccacacccgaaattcgcgacacagaccaccta
tttattgaccttccgaagctgaaggctcagttggaagcgtatattaatgggacatctgtt
cgtggatcttggagtagaaatgctgttcaaacgacaaatgcatggattagggaagggctt
caacagagatgcattacaagggatttaaagtggggagttccagtcccacatgagaaatat
aaggataaagtcttctacgtttggtttgatgctcctattggatacgtctcaataacgtca
tgctacacatctgaatgggagcagtggtggaagaatcctaagaatgctgagctttatcag
tttatggggaaagacaatgtgccatttcacactgtgatgtttccttctacccagcttgga
actggggaaaattggacattgatgaagacagtcagtgtgactgaatatttgacataccaa
ggcggaaagttctccaagagtaaaggtgttggattgtttggtaatgatgtaaaagataca
aatatccctgtagaagtatggagatactacttgctgatcaacaggcctgaggtatctgac
acatcgtttgaatgggaagatttgcaagcaaaactgaatgacgagttgttgaaaaaccta
ggcaattttgttaatcgagttgtgagttttatagcaaagccagaaaatataggttatggg
tctatcattcctgatgctcctggtgctgaatctcatcaactaacgatgtcactaagtgaa
aaggttgggaaattggtggaggagtatgttgaagccatggaaaaggttaagctcaagcag
gggctgaaaactgctatgctcatttcgggtgaagggaacgcatacttgcagaccagcgaa
ttttggaaactttacaaggaagataaaccttcctgtgcaattgttgtaagaagtgctgct
ggtttagtacaccttcttgcacgattgttagaacctttcatgccatctttttctcatgag
gtattcaaacagctaaatttgcctccacatttttcactctccgacgagagagcagaggta
ttacaagcaagtagaccttgggagattctgcctccaagccacaggataggcactcctcaa
ccattgttcaaggaactgaaagatgaagaagtgcaacagtacaaagcaaggttcgctgga
agtcaagtctga
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