Arabidopsis lyrata (lyrate rockcress): 9328729
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Entry
9328729 CDS
T01578
Name
(RefSeq) CSC1-like protein At1g11960
KO
K21989
calcium permeable stress-gated cation channel
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aly02000
]
9328729
Transporters [BR:
aly02000
]
Other transporters
Pores ion channels [TC:
1
]
9328729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
9328729
NCBI-ProteinID:
XP_020868464
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MATLEDIGVAATINILTAIIFLLAFAILRIQPFNDRVYFPKWYLKGIRSSPLHSGALVSK
FVNVNLGSYLRFLNWMPAALNMPEPELIDHAGLDSAVYLRIYLIGLKIFVPIALLAWSIL
VPVNWTSDGLQLAKLRNVTSSDIDKLSISNIERGSDRFWTHLVMAYAFTFWTCYVLMKEY
EKVAAMRLAFLQNEQRRPDQFTVLVRNVPADPDESISESVEHFFLVNHPDHYLTHQVVYN
ANDLAALVEQKKSTQNWLDYYQLKYTRNQEHKPRIKTGFLGLWGQKVDAIDHYIAEIEKL
NEQILEERKKVKKDDTSVMPAAFVSFKTRWGAAVCAQTQQSSDPTEWLTEWAPEAREVFW
SNLAIPYVSLTVRRLIMHIAFFFLTFFFMIPIAFVQSLASIEGIEKSAPFLKSIIEKKLV
KSVIQGFLPGIVLKLFLIFLPSILMVMSKFEGFVSLSSLERRAASRYYIFNLVNVFLGSI
IAGSAFEQLESFLKQSAKEIPKTVGVAIPIKATFFITYIMVDGWAGIAGEILRLKPLIFF
HIKNFLLVKTEKDREEAMNPGQINYHATEPRIQLYFLLGLVYAPVTPVLLPFIIIFFALA
YLVFRHQIINVYNQEYESAARFWPDVHGRIISALIISQILLMGLLSTKGAAQSTPFLLVL
PILTFFFHRFCKGRYEPAFLRHPLKEAMVKDTLERAREPNFNLKPYLQKAYIHPVFKDND
YEDSRFDEISGYCIEDSDDECVTVPTKRQSRINTPAVSHASRGSSRSPPSK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactagaagatattggagtagcagcaacaatcaacatactcactgcaatcatc
ttccttttggcttttgcaatcttgaggattcaaccattcaacgatagggtttatttccct
aaatggtatcttaaaggtataagaagcagccctttgcattcaggtgctcttgtcagcaag
tttgtcaatgtcaacttaggctcttacctccggttcttgaactggatgcctgcggctcta
aacatgcccgagcccgagcttattgaccatgctggattagattctgctgtctacttgagg
atttacttgatagggcttaagatctttgtcccgatagctttacttgcgtggtcgattctt
gtacctgtcaattggactagtgatggactgcaactagcaaagcttcgtaatgtaacatct
agtgacattgataagttatcgatctcaaatatcgaacgtggatcagacaggttttggact
caccttgtgatggcttatgcattcacattctggacttgctatgttctaatgaaagagtat
gagaaagtagctgctatgcgtttggcatttctccagaacgagcaacggcgccctgatcag
ttcacggttttggttaggaacgtaccagccgacccagacgagtccattagtgagagtgtg
gaacatttcttcctagttaaccatccggaccattatcttacgcatcaggttgtgtacaat
gcaaacgatttggcagcgttagtagagcagaagaagagcacacagaactggcttgactat
taccaattgaagtatacaaggaaccaggaacataagccaaggataaagacgggttttctc
gggctatggggacagaaagttgacgcaatcgatcattatatagctgaaatcgagaaacta
aacgagcaaatattggaggagaggaaaaaagtaaagaaagatgatacaagtgtaatgcca
gctgcttttgtctcgtttaaaacacggtggggtgctgcggtttgtgcacagactcaacag
tcgagtgatccgaccgaatggttaactgaatgggctcccgaggcacgggaagtgttttgg
tcgaacctcgcaataccttatgtctctttaacagtaagaagacttataatgcatattgca
ttcttcttcctcaccttctttttcatgattccaatagcctttgttcaatcccttgcaagc
atcgaaggcattgagaaatccgctcctttccttaaatccatcatcgagaagaagcttgtt
aaatcggttatccaaggttttcttccgggtatcgtgttaaagctctttctaatatttctg
ccaagcattttgatggtaatgtcgaagttcgaagggtttgtatcgttatcatcattagag
agaagagcagcttctcgatattatatctttaacctcgtcaatgtcttcctcggaagcata
atcgcgggctctgcatttgaacagctcgagtctttcctcaaacaatctgcaaaggagatt
cctaagacggttggagtagcgataccgataaaagcaacgttttttatcacatatataatg
gtggacggttgggcgggtattgcaggagagattctgaggctgaaacctcttatctttttc
catataaagaacttcttattggtgaaaaccgaaaaggatagggaagaagcaatgaacccg
ggacagatcaattaccatgcaacagagcctcggattcaactctacttcctcctcggtctt
gtctacgcccctgtgactccagttctactccctttcattataatcttctttgcattggct
taccttgtctttcgtcatcagatcataaatgtgtacaatcaagaatacgaaagcgcggct
aggttctggccagatgttcatggacgtataatatcagcattgatcatctcgcaaatcctt
ttgatgggactattgagcactaagggagcagctcaatccacgcctttcctcctcgtctta
ccgatcctaacctttttcttccaccggttctgcaaaggccgatatgaaccagcattcctc
cgtcaccccttgaaggaagctatggtcaaagatacattggaacgagcaagagaacccaac
tttaatctgaaaccgtatcttcagaaagcatatattcatccggttttcaaagacaacgac
tatgaagatagccggtttgatgaaatatccggttattgcatcgaagattcggatgatgag
tgtgttactgtgccgactaaacgtcagtcccggataaatacaccggcggttagccatgct
agccgcggttcttcgcgttcaccaccatcaaagtga
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integrated database retrieval system
