Arabidopsis lyrata (lyrate rockcress): 9328793
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Entry
9328793 CDS
T01578
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aly03009
]
9328793
Ribosome biogenesis [BR:
aly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
9328793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
9328793
NCBI-ProteinID:
XP_002889990
UniProt:
D7KQC5
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MAGSLGLTPESLKASGRSSENLSLLILQGKIKRDPEGYETELQLIYKQFKTSVDLFQQQA
ALSFSSVGGIGSDPSVSKDLGDRAMFLAHVTPFYPKQLSEFPAQLTDLLRTSCLAMPSGL
RNHVAQALILLMNRKSLVIEDLLALFLDIQTLGDKNLRALAFGHIVQTIRKMSITDPKHK
SLQKIVISMLEQEDEAKAKRALATLCALHKKKIWLGDKNERVAIAICEACFHSSPRIMIS
ALRFLLDYENIDDDDDSDAESDDDEDNKKIDQVVINRQAIYKANNKGTSSSKKKKQAKLQ
RAVKSIKRKQRSSSENTTSTFSPLNHLNDAQKFAERLFSRLQTIKGSGERVETRLMMIKV
IARTIGLHKLHLLSFYSFLQNYAMPHVKDITQILAAAVQSCHDGVPSDAVEPLFKQIVNQ
FVHDKSRPEAIAVGLNVVREMCLRIHDLMTEELLQDLALYKKSHEKAISAAARSLIALFR
EINPSLLVKKDRGRPGATIAKPKQYGESNVFSNVPNVELLQESDNESGSDGDQDDDDVEL
PIGDDVEQELIPDDCGSEDEAEEDSNDGDDMNNTEDDSDIDTSIGGDEDEEVNDSDEADT
DSENEEIESEEDDGEASDSSVEDNGNKEKAKGKKRKIVDFDANLLSADTSLRALKRFAEA
KNEKPSFDESDGILSNEDFRKIKELQAKKEAKIALARKGFKVPDSDQLSKKRVDPAKLEA
YIRHKLTKEQRLELVKAGREDRGKYKSKAAVKQKKTGGSSNKQKEHRKNMPLAAIRSKAG
KSKRTKKMKNSISGSQFRGRKAWK
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggccggatctctaggtttaacgccggaatccttaaaggcatctggccggagctcagag
aatctcagccttcttatccttcaaggtaaaatcaaacgtgacccagaaggttacgaaaca
gagctccaattgatttacaaacagttcaaaacctccgtcgatctcttccagcaacaagca
gctctcagtttctcctccgttggtggcattggctctgacccttctgtttccaaagacctc
ggtgaccgtgccatgtttctagctcacgttactcccttttacccgaagcaactctcggag
tttccagctcaattgactgacttactccgtacttcttgcttagcaatgccctcgggtctt
cgaaaccatgttgcacaagctctgattcttctaatgaatcgaaagagtcttgtcatcgag
gatttgctggctttatttctggatattcagactcttggtgacaaaaacctgcgagctctt
gcttttggtcacattgttcaaaccattcgtaagatgagtatcactgatcccaagcacaaa
tcacttcagaagattgtgatctctatgttagagcaagaagatgaagcaaaggctaagaga
gcacttgctactctctgtgcgctacacaagaaaaagatatggcttggtgataaaaatgaa
agagttgcaattgcgatttgtgaagcctgctttcattcttcacctaggataatgatctct
gctcttcgatttcttcttgactatgagaacattgacgatgatgacgatagtgatgctgaa
agcgatgatgacgaggataataagaaaatagatcaggttgtgattaatcgacaggctatt
tacaaggcaaacaacaaaggtacatcctctagcaagaagaaaaagcaagcaaaactacag
cgtgcagtgaaaagtattaaaagaaagcagcgttcgtcgtctgagaacaccacttcaaca
ttttcacctcttaatcatttaaatgatgcgcagaaattcgcagagagattgttttcccgt
cttcagaccatcaagggctctggtgaacgtgttgagaccaggttgatgatgattaaagtt
attgctcgcacaattggtcttcacaagttgcatttgctaagtttttattcttttcttcaa
aactacgctatgccgcatgtaaaggacattacacaaatacttgcagcagcagttcaatct
tgccatgatggggttccttctgatgctgtggagccactgttcaagcaaattgtgaatcag
tttgtacacgacaagtcacgtcctgaggctattgctgtcggactcaatgtggtacgagaa
atgtgcctgaggattcacgacttgatgacagaagagttgctgcaagatcttgctctgtat
aaaaagtcccatgaaaaagccatctcagcagcagctcgttccctcatagcattgttcaga
gagatcaacccttcgcttctggtgaaaaaagatcgtggccgtcctggagctaccattgca
aaacctaaacaatatggggagtctaatgtcttcagcaatgttcccaatgttgaattattg
caagaaagtgataatgagagtggctctgatggtgatcaagacgatgatgacgtggagttg
cctatcggcgatgatgttgagcaggaactgatacctgatgattgtggaagcgaggacgaa
gctgaagaagattccaatgatggtgatgatatgaataacactgaagatgatagtgatatt
gatacttcaataggtggtgatgaagatgaagaggtgaatgacagtgatgaagctgataca
gattcggaaaatgaggaaatcgaaagcgaagaagacgatggagaagcttctgattcttct
gtagaggataatggaaacaaagagaaagctaagggcaagaagaggaagattgtagatttt
gatgcgaatcttctctctgctgatacaagcctccgagcactcaagagatttgcagaagca
aagaacgaaaaaccatcttttgatgaaagtgatggcatactttcgaatgaggacttccga
aaaatcaaagaacttcaggcaaagaaggaagcaaaaattgcattggctcgaaaaggattc
aaggttccggattctgatcagctaagcaagaagcgggtcgatccagccaaacttgaagct
tacataaggcataaactaacaaaagaacaaagactggaattagttaaagcgggtagggag
gacagagggaaatacaaatccaaggctgccgtcaaacagaagaagacgggaggatcaagc
aataaacagaaggagcacaggaagaatatgcctcttgctgcaataagatcaaaggctggg
aaatcaaagcgaactaagaagatgaagaatagcatcagcggaagccagtttagaggaagg
aaagcttggaagtga
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