Arabidopsis lyrata (lyrate rockcress): 9328844
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Entry
9328844 CDS
T01578
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9328844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9328844
Membrane trafficking [BR:
aly04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
9328844
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
Mon2_C
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
9328844
NCBI-ProteinID:
XP_002890033
UniProt:
D7KBF6
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MGRLKLHSGIKAIEEEPEDFESTDSSNTTTLACMIDTEIAAVLAVMRRNVRWGGRYMSGD
DQLEHSLIQSLKALRKQVFSWNQPWHTISPMLYLQPFLDVIRSDETGAPITSIALSSVYK
ILNLNVIDQNTANIEDAMHLVVDSVTSCRFEVTDPASEEVVLMKILQVLLACMKNKASVM
LSNQHVCTVVNTCFRVVHQAGMKGELLQRVARHTMHELVRCIFSHLPDVDRTESTLVNRA
GSIKQEKAGVDSDYAIVSKPVEDGNANSEYDNENSVATFATGAQSLMDDGLVGPGSRKPA
SPYDLHIMTEPYGVPSMVEIFHFLCSLLNVVEHVGMGSRSNTIAFDEDVPLFALNLINSA
IELGGSSIRHHPRLLSLIQDELFRNLMQFGLSMSPLILSMVCSIVLNLYQHLRTELKLQL
EAFFSCVILRLAQGKYGPSYQQQEVAMEALVNFCRQKSFMVEMYANLDCDITCSNVFEEL
SNLLSKSTFPVNCPLSAMHILALDGLIAVIQGMAERISNGLTGLDLGPVHLDEYTPFWMV
KCDNYSDPNHWVSFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVAC
FFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQYMNLDTALRLFLETFRLPGESQ
KIQRVLEAFSERYYMQSPEILANKDAALVLSYSIIMLNTDQHNVQVKKKMTEEDFIRNNR
HINGGNDLPREFLSELFHSICNNEIRTTPEQGAGFPEMTPSRWIDLMHKSKKTAPYIMAD
SRAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTCVDGFLAIAKISACHHLEDVLDDL
VVSLCKFTTLLNPSSVDEPVLAFGDDAKARMATITIFTIANKYGDYIRTGWRNILDCILR
LHKLGLLPARVASDAADESELSSEQGQGKPLANSLSSAHLQSMGTPRRSSGLMGRFSQLL
SLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRP
QKGTSSPEDEDTAVFCLELLIAITLNNRDRIVLLWQGVYEHIATIAQSTVMPCNLVDKAI
FGLLRICQRLLPYKESLADELLRSLQLVLKLDARVADAYCEQIAIEVSRLVKANANHIRS
QAGWRTITSLLSITARHPEASEAGFNAVSFVMSEGTHLYPANYVLCVDAARQFAESRVGQ
SERSIRALDLMGDSLEYLAKWALSAKENMGEEDFGKMSQDIGEMWLRLVQGLRKVCLDQR
EDVRNHALQALQKCLGGVDGINLAHSMWSQCFDKVIFTVLDDLLEIAGGSQKDYRNMEGT
LLLAIKLLSKVFLQQLQELSQLSTFCKLWLGVLTRMEKYMKVKVRGKKSDKLQESVPELL
KNILLVMKTKGVLLQRSALGGDSLWELTWLHVNNIAPSMRLELFPDQESTQLGDDETVSN
GLSSPEAGANTTGS
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcctaaagttgcattcaggaatcaaggccattgaggaagagcctgaggacttt
gagagtactgattcaagtaatactaccactttagcatgcatgattgatacggaaattgct
gctgttttagcggttatgagaagaaatgttagatggggaggtcgatacatgtctggtgat
gatcaactagaacactccttgattcagtcacttaaagctcttagaaaacaggtgttctca
tggaaccagccgtggcatacgattagtcccatgttgtatcttcagccctttctggatgtg
atacggtcggatgaaactggagcaccgataaccagcattgctttatcatcagtttacaag
atcttaaatctgaatgtaattgatcaaaatactgcaaatattgaagacgctatgcatttg
gtagttgattctgtgacaagctgtcgatttgaggtgacagatcctgcatcagaagaggtt
gtgctaatgaagatacttcaggttcttctagcatgcatgaaaaataaagcatcagttatg
ctaagcaatcagcatgtatgcactgttgtcaacacttgttttcgtgttgtccaccaagca
ggaatgaaaggtgagttactgcaacgtgttgctcgccacacgatgcatgaactagttagg
tgtatcttctcgcatctcccagatgttgacagaacagaaagtacacttgtcaacagagct
ggaagcatcaaacaagagaaagctggagtcgacagtgattatgccattgtgagtaaacca
gtcgaggatggaaatgctaattccgagtatgataatgaaaattctgtggcaacttttgca
actggtgctcaaagtttgatggatgatggactcgttggccctggaagcagaaagccggcg
tctccatatgatttgcatataatgacagagccatacggagtcccaagtatggtggaaata
tttcacttcttgtgctctttgttaaatgtggttgaacatgttgggatgggatcccgatca
aataccatagcatttgacgaagatgtgcctctgtttgcattgaacttgatcaactcagcc
attgaattgggtggatcatccatccgccatcacccaagattgttaagcttaattcaagat
gagttatttcgtaacttgatgcaattcggattgtcaatgagcccccttattctttcgatg
gtttgcagcattgtgctcaatttgtatcaacatctacgtactgaactcaaactgcagctt
gaggcattcttttcatgtgtgattctaaggcttgctcaaggaaaatatgggccctcgtat
cagcagcaagaggttgctatggaggctcttgtgaacttttgtaggcagaagagttttatg
gtggaaatgtatgccaatctcgattgtgatataacttgcagcaacgtgtttgaggagctg
tctaaccttctatcgaagagcacatttcctgtgaactgtcctttgtccgcaatgcacatt
cttgctctggatggcctaatcgctgttattcagggaatggctgagaggataagtaatgga
ttgactggtctggacttgggtcctgtccatcttgatgagtacacacctttctggatggtt
aagtgtgacaactatagtgatccaaatcactgggtttcatttgtccgcaggagaaaatat
atcaagagaaggttaatgattggagcagatcattttaacagggatccaaagaaggggtta
gaatttctccaaggcacacatcttttgcctgacaaacttgatccccaaagtgtagcttgc
tttttcagatatactgctgggcttgataagaaccttgttggagattttcttggaaatcat
gacgaattttgtgttcaagttctccatgagtttgctgggactttcgatttccagtacatg
aatctggatactgcactccgactgttcttggaaaccttcaggttgcctggagaatctcag
aaaatacagagagtgcttgaagcgttctcggaaagatactatatgcaatctcctgagatt
ctggccaacaaggatgctgctcttgtgctatcatactctattatcatgcttaacactgat
cagcacaacgttcaagtgaagaaaaaaatgacagaagaggatttcattcgcaataatagg
catatcaatggaggaaatgatctacctcgagaatttttgtctgaactctttcactccatc
tgcaacaatgagatcaggactactccagaacaaggtgcaggctttcctgaaatgactccc
agccgttggattgatttgatgcataaatcaaagaaaacagctccatatattatggctgat
tcaagggcttatcttgaccatgatatgtttgctatcatgtctggtccaaccattgctgcc
atatcagtcgtttttgaccatgcagaacatgaagatgtttaccagacatgcgtcgatgga
ttcttggctattgctaaaatttctgcctgccatcatcttgaagatgtgcttgatgatctg
gtagtatctctctgcaaattcacaactcttttgaatccgtcatctgttgatgaaccggtt
cttgcatttggtgatgacgcaaaagcaaggatggctactatcactatttttaccattgca
aacaaatatggagattatatacgtacgggttggaggaacatattggactgtatcttacgg
ctacataaacttggacttctgccagctcgtgtagccagtgatgcagctgatgaatctgaa
ctttcatctgagcaaggacaaggaaagcccctcgcgaattccctatcttcagctcatcta
cagtcaatgggaactccgaggagatcttccggattgatgggaaggtttagtcagcttctt
tcccttgatacagaagagccaagatcacagcctactgagcaacagcttgcagctcatcaa
cgaacacttcaaacaattcagaaatgtcacattgacagcatatttactgaaagcaagttt
ctacaagctgaatctttgctgcagcttgcgcgtgctctcatttgggctgcaggtaggcca
caaaaaggaaccagttctccagaggatgaggatactgcagttttctgtctggaattgctt
attgcaatcactctaaacaacagagacaggatcgttctcctatggcaaggcgtctatgaa
catatagctacaattgctcagtcaacggtgatgccctgcaacttagtggataaagctatt
tttggtctacttcggatctgccagagactacttccttataaagaaagcctagctgatgag
cttttgagatctcttcagcttgtgctgaaactggatgcacgtgttgctgatgcctattgt
gagcaaattgcaattgaagtcagccgtctagtgaaagcaaatgctaatcacatcaggtct
caggcgggttggagaacaatcacatccttactctccatcacagcgcggcacccagaagct
tctgaagcaggatttaatgccgtatcctttgttatgtctgaaggaactcacctgtaccca
gccaattatgtactctgtgttgatgctgcaagacagtttgctgagtcccgtgtgggacag
tccgaacggtctatccgtgcccttgatctaatgggagattcattagaatatttggctaag
tgggctctgtcagctaaggaaaacatgggagaagaagatttcgggaagatgtcacaagat
attggggaaatgtggttaaggcttgttcaaggactaagaaaagtgtgtttagaccagaga
gaggatgtccgaaaccacgcgttacaggcattacagaagtgtttaggcggagtagacggg
atcaacctagctcatagcatgtggtctcaatgctttgacaaggtaatcttcacggtttta
gatgacttacttgagatagctggtgggtcacagaaagactaccgaaacatggaaggcaca
ttgcttcttgcaatcaaacttctctccaaagtgtttcttcagcaactccaagagctatct
cagttatcaaccttctgcaagctatggctcggtgttctaacccgaatggagaaatacatg
aaagtgaaagtaaggggcaaaaaaagcgacaagcttcaagaatcagtgccagagcttcta
aagaacatattgctcgtaatgaaaacgaaaggcgtgcttttgcaaagaagtgctcttggt
ggagatagcttatgggaactaacatggcttcatgttaataacattgctccttctatgcga
ctcgagctattccctgatcaagaatccacacagcttggtgatgatgaaacagtatcgaat
ggcttatcttctcctgaagctggagcaaacacaacgggttcgtga
DBGET
integrated database retrieval system
