Arabidopsis lyrata (lyrate rockcress): 9328959
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Entry
9328959 CDS
T01578
Name
(RefSeq) probable ubiquitin receptor RAD23a
KO
K10839
UV excision repair protein RAD23
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03420
Nucleotide excision repair
aly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9328959
09124 Replication and repair
03420 Nucleotide excision repair
9328959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aly03051
]
9328959
03400 DNA repair and recombination proteins [BR:
aly03400
]
9328959
Proteasome [BR:
aly03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
9328959
DNA repair and recombination proteins [BR:
aly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
9328959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
Herpes_UL32
TECR_N
UBA_3
Dsc3_N
Rad60-SLD_2
UBA_RAD5A
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
9328959
NCBI-ProteinID:
XP_002890153
UniProt:
D7KDN8
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV
ENKVTEEGFLVVMLSKSKTPSSAGPSSIQPTSTTTSTISPTPLAAPSIAVPASNSTPVQE
QLPAQSDTYGQAASTLVSGSSVEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYL
YSGIPETVAIPATNLSGVGSGAELTAPPASGGPNSSPLDLFPQEAVSDAGGGDLGTLEFL
RGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDM
DIFDQPEQEMPHAVNVTPEEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLEHSA
DFED
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaccgttaagactctcaagggtagccattttgaaattagagttcagcccacc
gacacgataatggcggtgaagaagaatattgaagattcacaaagcaaagacaactatcct
tgtggacagcaattgctgattcacaatggcaaagttttgaaagatgaaactactttggtg
gagaacaaggttaccgaagaaggttttcttgtcgtcatgcttagcaagagtaaaactcca
agttcagctggtccctcttccattcaacctacttctaccacgacatctaccatatctcca
accccgcttgcagctccgtctatagctgtgccagcttctaattctactcctgttcaagaa
cagctgccggcacaaagtgacacctatggtcaagctgcttcaactttagttagtggcagt
agtgttgagcagatggtacaacaaataatggaaatggggggaggcagctgggacaaagaa
acagttactcgcgcacttcgtgcagcgtacaacaatcctgagagagcagtggattatcta
tattctggaattcctgaaacagtagccattccagcaactaatttatctggtgtaggatct
ggtgcagaacttacagctcctcctgcctctggaggacctaattcatctcctttggatttg
tttccccaggaagcagtttctgatgctggtggtggagatcttggaacgcttgaattcctc
agaggcaatgatcagttccaacaattacgctccatggtcaattccaacccccagattctg
cagcctatgcttcaagagctcggaaaacagaaccctcaacttctgaggttaattcaagag
aaccaagcagaatttcttcagttactaaacgagccctatgaaggatctgacggggatatg
gatatttttgaccaacccgagcaagaaatgccccacgcagtcaacgttacccctgaagag
caagaagcgattcaacggcttgaggcaatggggtttgatagagcactagtcatagaagca
ttccttgcctgtgaccgtaacgaggaattggctgcaaactatctgctagagcactcagca
gattttgaagactga
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integrated database retrieval system
