Arabidopsis lyrata (lyrate rockcress): 9328995
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Entry
9328995 CDS
T01578
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aly03041
]
9328995
Spliceosome [BR:
aly03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
9328995
Other components
Complex C specific factors
9328995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
9328995
NCBI-ProteinID:
XP_020866812
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MDEYQEMERFSMDNDYEGGRWEGDEFVYEKRKEKRKQTKNDATYGIFAESDSDSDDSGGG
GSRRKRRKDRDSGRNADLTKPVNFVSTGTVMPNQEIDKGSREHNDEKDRDRIEDGDMIDE
DVEVRGGLGMGSSGLGLGFNANGFDDEDNLLPGALGKKIADGAKMRGKAKMEKRGQEGGG
AKGGKKNTLGSDIGKFEKSTKGIGMKLLEKMGYKGGGLGKNQQGIVAPIEAQLRPKNMGM
GYNDFKEAKLPHLKKVEEKKIVGVSVSENEQSHGDRGGKNLWKKKKVRKAVYVTAEELLE
KKQEQGFGGGQTIIDMRGPQVRVVTNLENLDAEEKAKEADVPMPELQHNLRLIVDLVEHE
IQKIDRDLRNERESALCLQQEKEMLVNEEEKQKRHLDNMEYITDEISRIELENTAGNLTL
DSLANRFEDLQACYPDDYKLCNLSTIACSLALPLFIRMFQGWDPLRDPVHGLKAISSWRK
LLEVEEDQNIWVVSTPYSQLVSEVVLPAVRIAGINTWEPRDPEPMLRFLETWENLLPSSV
LHTILDTVVLPKLSTAVEYWDPRRELVAIHVWVHPWLPILGEKLEFLYQIIQMKLSNVLD
AWHPSDSSAYTILSPWKTVFDTSSWEQLMRRYIVPKLQLALQEFQINPANQNLERFHWVM
KWASAVPIHIMADLMGRFFFPKWLDVLYLWLRSNPGFEEIHGWYLGWKELFPQELSANER
IRIQLKRGLDMLMEAVEGVEVSQPRARANEHTQFEPSQAQAQAKAQMDSTEVLSLKEVLE
VFAQEKELLFKPKPNRMHNGLQIYGFGNVSVIIDSVNQKLLAQKDGDWYLVTPDDLLRMH
NNTTVSGKR
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcaagagatggagagatttagtatggataatgactacgaaggaggtcga
tgggaaggtgacgagttcgtatacgaaaagaggaaggagaagcggaagcaaaccaaaaac
gacgctacttatggaatcttcgctgagagcgattcggattccgatgattctggcggcggc
ggcagtcgtaggaagaggcgtaaggatcgtgattcgggaaggaatgccgacttaaccaag
cctgtcaattttgtatctacaggtactgttatgcctaatcaagagattgataagggttct
agagaacataatgatgagaaagatagggatagaatcgaagatggtgatatgattgatgag
gatgttgaagttagaggtggattgggtatgggaagctcaggtttagggttagggtttaat
gcgaatggttttgatgatgaggacaatctcttaccgggtgcattggggaagaagatagct
gatggggcaaagatgagagggaaggccaaaatggagaagagaggtcaagagggtggtggt
gcaaagggaggaaagaagaataccttaggaagtgatataggtaagtttgagaaatctact
aaaggaataggtatgaaactgcttgaaaagatggggtataagggaggtgggcttgggaag
aatcagcaaggtattgtagctccaattgaagcgcagttgaggccgaagaatatgggtatg
gggtataatgatttcaaggaagcaaagttgcctcatttaaagaaggttgaggagaagaag
attgttggggtcagtgttagtgagaatgaacagagtcatggtgatagaggagggaaaaat
ctttggaagaagaagaaggtgaggaaggcagtttatgtcactgcagaggagttgttggag
aagaagcaggaacagggctttggtggtgggcagaccattattgatatgcgaggaccacaa
gttcgggttgtgacaaatttggaaaatttagatgcagaggagaaagcaaaagaagcagat
gttccaatgccggagttacaacacaacttgcgcttgattgttgatctagttgagcatgaa
attcaaaagattgatagggacttgaggaatgagagagaatcagccttatgcttacagcag
gagaaggagatgcttgtaaatgaggaagagaaacaaaaaagacacttagacaacatggaa
tatatcacagatgaaattagtcgaattgagctggaaaatacagctgggaatttgacactg
gactcacttgcaaatcgttttgaggaccttcaagcatgctatcctgatgattataagctt
tgtaacttgtccaccattgcttgctcactggccttgcctctctttattaggatgtttcag
ggttgggaccctcttagggatccagtgcatggtctcaaggctatatcttcttggagaaag
cttttggaagtcgaggaagatcaaaatatctgggtagtttcaacgccttatagccaacta
gtctcggaggtagtgttacctgctgttcgaatagcaggcattaatacctgggaacctaga
gaccctgagccgatgcttagatttttagagacatgggaaaatttgctgccttcatctgtc
ttgcatacgattttggacacagtagtgctgccaaaattgtcaactgctgttgaatattgg
gatccacgaagggaacttgttgccatccatgtttgggtgcatccttggttgccaatactt
ggtgagaagttggagtttctttatcagatcattcagatgaaattgagtaatgttcttgat
gcttggcatcccagtgattcatctgcgtacactattctttccccatggaagaccgttttt
gatacttcaagctgggaacagcttatgcgccgttacatagttcccaaacttcagctggct
ttgcaagagtttcagataaacccggcaaaccagaatttagaacggttccattgggttatg
aagtgggcatctgcagtacccatacatataatggctgatttgatggggaggttcttcttc
cccaaatggctggatgtgttgtacctttggttgcgttctaatccggggttcgaagagatc
cacggatggtatttaggttggaaagagttattcccgcaagagctttcagcaaatgagagg
atccgaattcagttaaagcgtggtttagatatgttgatggaagctgttgaaggagttgaa
gtgtctcagccaagggcaagggcaaatgagcatacacagttcgagccgtctcaggctcaa
gctcaggccaaggctcagatggatagcactgaggtgctgagtttgaaagaagtgttggaa
gtatttgctcaagagaaggagttgctgttcaaacctaaaccgaatagaatgcacaatggt
cttcagatatatgggtttgggaatgtgagtgttattatagactcagtgaaccagaagctg
ttggctcagaaagatggagattggtatcttgtaactcctgatgacttattaaggatgcac
aacaatacaactgtttctggaaaaagatag
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