Arabidopsis lyrata (lyrate rockcress): 9329044
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Entry
9329044 CDS
T01578
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
9329044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9329044
03012 Translation factors [BR:
aly03012
]
9329044
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
9329044
Translation factors [BR:
aly03012
]
Eukaryotic type
Release factors
9329044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
9329044
NCBI-ProteinID:
XP_020869036
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MDLEAEIRALQLDSADENNGVVIPEDHNSDEVENLDKAPEEDLKDEVQESVPVPDEQQAS
EDHDEVMLHPVHNPAKAKEKAAQDKAAKEEAEDEAEANKKRHLNVVFIGHVDAGKSTIGG
QILYLSGQVDERQIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETQST
RFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGV
SKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQR
MGQNVCPWWSGPSFFEVLDSIEIPPRDPNGPFRMPIIDKFKDMGTVVMGKVESGSIREGD
SLVVMPNKEHVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILAGFVLSSIVNPVPVV
TEFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELKSQIDLKTRKPMKKKVLFVK
NGAAVVCRIQVTNSICIEKFSDFPQLGRFTLRTEGKTIAVGKVTELISAASSA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggctgagatacgcgcattacagcttgattcggcagatgaaaacaatggt
gttgtcattccagaagatcataactcagatgaagttgagaatttggataaagcaccagaa
gaagacttgaaagatgaagtgcaagaatctgtcccggttcctgatgagcaacaagcttct
gaggatcatgatgaagtaatgcttcatccagtccataacccagcgaaagctaaagagaaa
gctgctcaagacaaggctgccaaagaggaagctgaagatgaagcagaagcaaataaaaag
agacacttgaatgtggtgttcattgggcatgttgatgctggtaaatccacaattggagga
cagattctttatcttagcggtcaggtggatgaacgacaaatccaaaagtatgagaaggaa
gcaaaagataaaagtagagaaagctggtatatggcatatataatggatacaaatgaagaa
gagaggctcaagggtaaaacagttgaagttggaagggcacactttgaaactcagagcact
agattcaccattttggatgctccggggcacaagagttacgtacccaatatgattagtgga
gcatctcaagctgacatcggtgtgctggtgatttcagctcgaaaaggtgaatttgaaacg
ggatatgagaggggtgggcagacacgtgaacatgttcaacttgccaaaacattgggtgtt
tcgaagctgattgttgttgtgaacaagatggatgacccaactgtgaactggtcgaaagaa
aggtacgatgaaattgaacaaaaaatggtaccgtttttgaaggcctctggctacaacaca
aagaaagatgttgtcttcttgcctatatctggtctaatgggcaaaaatatggaccagagg
atgggtcaaaatgtttgtccttggtggagtggccctagcttttttgaagtccttgattct
attgaaattccgccacgggatcctaatggtccattcaggatgcctattatcgataagttc
aaggacatgggaactgttgttatgggaaaagtagaatctggcagcattagggagggtgat
tccttggttgttatgccgaacaaggaacatgtgaaagttgttgctatatattgcgatgag
gataaagttaagcgtgcaggaccgggtgagaatttgagagttcgtattactggcattgaa
gatgaggacatccttgctggttttgttttatccagtattgttaaccctgtccctgttgtt
actgagtttgttgcccaactacaaatccttgagcttcttgacaacgctatttttacagct
ggttacaaggcaattctccacatccatgcggttgtcgaggagtgtgagattattgaattg
aaaagccaaattgatctcaaaacaaggaaaccaatgaaaaagaaagttttgtttgtgaag
aatggtgctgctgttgtgtgccgcatccaggttacgaattcaatttgtattgaaaaattc
tcggatttccctcaacttggaagattcactctacgaacggaaggaaaaacaattgcggtt
ggaaaggttactgagctcataagtgctgcctcaagcgcttga
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