KEGG   Arabidopsis lyrata (lyrate rockcress): 9329045
Entry
9329045           CDS       T01578                                 
Name
(RefSeq) receptor for activated C kinase 1A
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03010  Ribosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    9329045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9329045
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9329045
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     9329045
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   9329045
  Exosomal proteins of colorectal cancer cells
   9329045
  Exosomal proteins of bladder cancer cells
   9329045
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_EML Beta-prop_SPT8 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 ANAPC4_WD40 TRM82_WD CFAP251_N Beta-prop_VPS8 ASA1 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_NWD2_C PAC11 Beta-prop_WDR75_2nd Beta-prop_ACSF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 PROPPIN Tricorn_2nd Beta-prop_pof12 DUF7899 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 9329045
NCBI-ProteinID: XP_002890259
UniProt: D7KGA6
LinkDB
Position
Unknown
AA seq 327 aa
MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT
GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI
VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN
LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHA
LCFSPNRYWLCAATEQGIKIWDLESKSIVEDLKVDLKAEAEKSDNSGPAATKRKVIYCTS
LNWSADGSTLFSGYTDGVIRVWGIGRY
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcggaaggactcgttttgaaaggcaccatgcgtgcacacactgacatggtgacggca
atcgccaccccaatcgataacgcagacatcatcgtctcagcttcccgcgacaaatccatc
attttgtggaaactcaccaaggacgacaaagcctacggtgtagctcaaaggcgtctcact
ggtcactctcacttcgttgaggatgttgttctctcctccgatggacaatttgcgctctcc
ggcagctgggacggcgagctccgtctttgggatctcgctgctggtgtctccactcgtaga
ttcgttggacacaccaaggacgtgctctccgtcgcattctcactcgacaaccgtcagatc
gtctctgcgtctcgtgaccgtacgatcaagctctggaacactctaggtgagtgcaagtac
acgatctcagaaggtggtgagggacaccgtgattgggttagctgcgtcagattcagccct
aacactctccagccgacgattgtgtcagcttcgtgggacaaaaccgtgaaagtgtggaac
ctctcgaactgcaagctcagatcgactcttgctggtcacaccggatacgtgagcacggtg
gctgtatcacctgatggttctctttgtgcaagtggaggcaaagacggtgtggttttgctt
tgggatttggctgaggggaagaagctttactctcttgaagctaactctgtgatccatgcc
ctttgcttcagtcccaacaggtactggctctgtgctgcaactgaacagggtattaagatt
tgggacctggagagcaagagcatcgttgaggatttgaaggttgatctcaaggctgaggct
gagaagtctgacaacagtggtcctgctgccaccaagaggaaggttatttactgcacaagc
ttgaactggagcgctgacggaagcaccctgttcagtggttataccgatggagtcatcaga
gtttggggtattggtcgttactag

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