KEGG   Arabidopsis lyrata (lyrate rockcress): 9329080
Entry
9329080           CDS       T01578                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC31 homolog A
  KO
K14005  protein transport protein SEC31
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    9329080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9329080
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aly02044]
    9329080
Membrane trafficking [BR:aly04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    9329080
Secretion system [BR:aly02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   9329080
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40 WDR55 TPR_Sec16 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 TPR_GEMI5 Beta-prop_HPS5 MIOS_WD40 ANAPC4_WD40 Beta-prop_DCAF4 WD40_RFWD3 SRA1 Beta-prop_IFT140_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 9329080
NCBI-ProteinID: XP_020869777
LinkDB
Position
Unknown
AA seq 995 aa
MVVFTEHQKFMLRNYPYAFTIYIPTLCSPFENTLQILFVPSTLLRNRFLRVTPTMDCINS
IDRSAFVAIAPESPFIATGTMAGVVDLSFSSSSNLENFXLDFQCSDRELNLVGHCKSSER
FNRLAXGSYGSGSDGHIAGGLFDGNIGLWNPIRLVRGLEFNVKSPNKLASGTDDGTVCIW
DLTNPSKPCHYLKGTGSYMQSEISSISWNREFQHVLASTSYKGTTVIWDVNNEKVITDFK
NTVRCSILQWDPDNYNQIMVASDEDSSPNVKLLDIRYLQSPVRTFIGHQKGVIAMEWCPS
DSLYLLTWAKDSRTICWNTKTRKIAAELPTGQNWNFDVHWYPKMPGVISASSVDGKINIY
NLEGCSSYGTVENNLDSDLLTAPKWXKCPVGASFGFGGKLISFNKNLPEASEVFLHTLAT
EQSLVNRISKFEAALENGEKTSIRGLYEKKTEEAESEEEKETWGLLKIMLEEDGNAKTKL
RTHLGFSLPSDEKDQTVNEPHATCSSTNEEETKKMPEPEGESSYPTFDDAIQRSLIVGDY
KGAVAQCLSANKMADALVIAHVGGTELWESTRNIYIMRMSNAPYMKVVSAMMNNDLMTFV
HTRPPKSWKETLALICTFAEGDEWISLCDALTSNLMDPGFTLAATLCYICSGNVDKTVDI
WSRSLEKESDGKSYAERVQDLMERTLVLALVTGNKRFSASLRKLFESYAEILASQGLLAT
AMKFLKFLESGDFSPELSILHNQIALYAEPEAANTSASENTQSKISMPYQKKYFLPAPLS
NAQPSRTTFVPLNPPRELKNADQYQQPTMDSYSFNRSADPAYNASPGPGSHRSIPSQVGP
YINSKIPQTVAPPMGHMNPTHQVAMQPAPVAPPPTVQTADTSNVPAHQKPIVSTLTRLFK
ETFEXIRSYSRATPAEKRKVEDNSRKLGALFLKLNSGDISKNAAGKLTQLCQALNKNNLG
AALQIQVAMTNTEWYECSFWLPTLKQIIKGKQNVQ
NT seq 2988 nt   +upstreamnt  +downstreamnt
atggtagtgttcacggagcaccaaaagttcatgttacgaaattacccttacgcgtttact
atatatatccctactttgtgttcaccattcgaaaacacattacaaattctctttgttccc
tccacactcttgagaaatcgttttcttcgagtcactcctacaatggattgcataaacagt
attgatagatccgctttcgttgccattgcgccggaatctccgttcattgcgaccggaaca
atggccggagtagtagatctgtcgtttagttcatcctctaatctcgagaatttttaactc
gattttcagtgcagcgatcgtgagctgaacctagtaggtcattgcaaaagctctgagcgg
tttaatcgactcgcttagggaagttatggatctggatctgatggtcacatcgccggtggc
ctctttgacgggaacatcggtttatggaatccaattcgtctggttcgtggtcttgaattt
aatgtcaagtccccaaataaacttgcttctgggactgatgatggtacagtttgtatttgg
gatttaacaaatccttcaaagccttgtcattatctaaagggtactggttcttatatgcaa
agtgaaatctcttctatatcatggaatagagagtttcaacatgttttagcatctacctca
tacaaagggactactgtgatatgggatgtgaataacgagaaggttataacagacttcaaa
aataccgttaggtgctcaattttgcaatgggatcctgataattataatcagataatggtt
gcatcagatgaagatagttcaccaaatgtgaagcttttggacataaggtatctacaatca
cctgttcgcacatttattggccaccaaaaaggtgtgattgcaatggagtggtgtccaagt
gacagtttgtatttacttacctgggcgaaagacagccgaactatttgctggaacacaaag
acaagaaagattgcggctgagttacctactggccaaaattggaattttgatgttcattgg
tatccaaagatgcctggagttatatcagcatcttcagttgatgggaaaattaacatctat
aaccttgagggttgcagcagctatggtactgtggagaacaatttagattcagatctttta
acagcaccaaaatggtgaaaatgcccggttggtgcatcttttggatttggaggaaagctt
atttcgttcaacaaaaatctccctgaggcatctgaggtttttctgcataccctggccaca
gaacaaagtttggtgaatcgaatttctaaatttgaagctgcattagaaaatggagagaag
acttcaattaggggtttgtacgagaagaaaacagaagaggccgaatccgaggaagagaag
gaaacatggggattgctgaaaatcatgcttgaagaagatgggaacgcaaagacgaagttg
cgtacccatcttggctttagtttaccttctgatgaaaaggatcaaactgttaacgagcct
catgctacatgttcttctacaaacgaggaagaaactaagaaaatgccagaaccagaagga
gagagctcttatccaacatttgatgatgctatccaacgttcattgattgtgggagattac
aagggagcagtggctcagtgtttatctgcaaataagatggctgacgctttagtgattgct
catgttggtggtacagaattgtgggagagtactcgcaatatatatataatgaggatgagc
aatgcaccttacatgaaggttgtctctgcaatgatgaacaatgatttaatgacctttgtt
catacaagaccacctaaatcctggaaagaaacacttgctctcatctgcacttttgcagaa
ggagatgaatggataagcctctgtgatgctcttacctcaaatttgatggatcctggtttt
acgttggctgcaactctgtgttacatttgctcaggcaatgtcgacaaaacagtagacatt
tggtcaaggagccttgaaaaagaaagtgatgggaaatcttatgctgagcgtgttcaagat
cttatggagaggactcttgtccttgctttggtaactggcaacaagagattcagtgcgtct
ctacgtaaactctttgagagttatgctgagatattggccagtcaaggacttcttgcaacc
gctatgaagttcttaaaatttcttgagtctggcgatttctcacccgaactttcaatcttg
cataatcagattgctctgtatgcggaacctgaagctgctaacacttctgcttcagaaaac
actcagtctaaaatctccatgccatatcaaaagaaatattttcttccagctccattaagc
aatgctcagccatcaagaactacttttgttcctttgaatcctcctagagaactaaagaac
gcggaccagtatcagcaaccaaccatggattcttattcgtttaatcgatccgctgaccca
gcttacaatgcatcacccggtcctggctcacatcgatccattccttcacaagttggtcca
tatattaactccaagattccccaaactgttgctccaccaatgggacatatgaatccaaca
caccaggtagcaatgcaaccagcacctgtagctccaccaccaactgttcagaccgcagat
acttccaatgtaccagcccaccagaaacctattgtgtctacattgacaaggctatttaaa
gagacatttgaanctattaggagttactcaagagctactcctgccgaaaagcgtaaggta
gaagataactcaagaaagctaggagctctgtttttgaaactaaatagtggagacatctca
aagaacgctgctggaaaactcactcagctctgtcaagctctgaacaaaaataatcttggt
gcagctttacaaatacaggtggctatgacaaacaccgaatggtatgagtgcagtttttgg
cttccaacactaaagcaaatcatcaagggaaagcaaaatgttcagtga

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