Arabidopsis lyrata (lyrate rockcress): 9329310
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Entry
9329310 CDS
T01578
Name
(RefSeq) protein GIGANTEA
KO
K12124
GIGANTEA
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
9329310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF6658
Motif
Other DBs
NCBI-GeneID:
9329310
NCBI-ProteinID:
XP_002890532
UniProt:
D7KMJ4
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MASSSSSSERWIDGLQFSSLLWPPPRDPQQHKDQVVAYVEYFGQFTSEQFPDDIAELVRH
QYPSTEKRLLDDVLAMFVLHHPEHGHAVILPIISCLIDGSLVYSKEAHPFASFISLVCPS
SENDYSEQWALACGEILRILTHYNRPIYKTEQQNGETERNCFSKATTSGSPTSEPKALSP
TQHERKPLRPLSPWISDILLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTIASRGSGKHP
QLMPSTPRWAVANGAGVILSVCDDEVARYETATLTAVAVPALLLPPPTTSLDEHLVAGLP
ALEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDYASGV
RLPRNWMHLHFLRAIGIAMSMRAGVAADAAAALLFRILSQPALLFPPLSQVEGVEIQHAP
IGGYSSNYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLNSSA
VDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVETILSRTFPP
ESSREHTRKARSSFTTRSATKNLVMAELRAMVHALFLESCAGVELASRLLFVVLTVCVSH
EAQSSGSKRPRSEYAITTENVEANQPVSDNQTANRKSRNVKGQGPVAAFDSYVLAAVCAL
ACEVQLYPMISGGGSFSNSAVARTITKPVKINGSSNEYGAGVDSAINHTRRILAILEALF
SLKPSSVGTPWSYSSSEIVAAAMVAAHISELFRRSKALTHALSGLMRCKWDKEIHKRASS
LYNLIDVHSKVVASIVDKAEPLEAYLKNTPVQKDSLTCLNWKQQNTCASTTRFDTAVTSA
SRTEMNPRGNHKYARHSGEGSGRPSEKGIKDFLLDASDLANFLTADRLAGFYCGTQKLLR
SVLAEKPELSFSVVSLLWHKLIAAPEIQPTAESTSAQQGWRQVVDALCNVVSATPAKAAA
AVVLQAERELQPWIAKDDEEGQKMWKINQRIVKVLVELMRNHDRPESLVILASASDLLLR
ATDGMLVDGEACTLPQLELLEATARAIQPVLAWGPSGLAVVDGLSNLLKCRLPATVRCLS
HPSAHVRALSISVLRDIMNQSSIPIKVTPKLPTTEKNGMNSPSYRFFNAATIDWKADIQK
CLNWEAHSLLSTTMPTQFLDTAARELGCTISLSQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggctagttcatcttcttcatctgagagatggattgatggtctgcagttctcttccttg
ttatggcctcccccacgagatcctcaacaacataaggatcaagtcgttgcttatgtcgaa
tattttggtcaatttacatcagagcaattcccagatgacattgctgagttggtccggcat
cagtatccatcaactgagaagcggcttttggacgatgtgctggcgatgtttgtcctccat
catcccgagcatggtcatgcagtcattcttccaatcatttcatgtcttattgatggctcg
ttggtgtacagcaaggaagctcatccgtttgcctctttcatatctttagtttgcccaagt
agtgagaatgactattcggagcaatgggctttggcatgcggagaaatccttcgcattttg
actcattacaatcgtcccatatataagactgagcaacaaaatggagaaacagagagaaat
tgtttcagcaaagctacaacaagtggttctccgacttcagagcctaaggctttatcacca
acacagcatgaaaggaaacctttaaggcctttgtctccatggatcagtgatatactactt
gccgctcccctgggtataagaagtgactatttccgatggtgtagtggtgtaatgggtaaa
tatgctgctggagagctcaagccgccaaccattgcttctcgaggatctggtaaacatcct
caactgatgccttcgacgccaagatgggcagttgctaatggagctggtgtcatactgagt
gtttgtgatgatgaagttgctcgatatgagactgctacgcttacagcggttgctgtccct
gcacttcttcttcctcccccaacgacatccttagatgagcatctagttgctggccttcca
gctcttgaaccatatgcacgtttgtttcatagatattatgccattgcaactccaagtgct
actcagagacttcttcttggactcttagaagcaccaccgtcgtgggctccagatgcactt
gatgctgctgtacagcttgtagaactccttcgagctgctgaagattatgcatctggtgta
aggctacccaggaactggatgcatttgcacttcttgcgggcaataggaattgctatgtct
atgagggcaggtgttgctgctgatgctgcagccgctttgcttttccgcatactctcacag
ccagcactgctttttcctccgctaagtcaagttgagggagtagaaattcagcacgcgcct
attggtggctacagttcaaattacaggaaacagatagaagttcctgcagcagaagcaacc
attgaagccactgcccaaggaattgcgtcaatgctttgtgctcatggtcctgaagttgaa
tggagaatttgcactatatgggaagctgcttatggattgatccctctaaattcttcagcg
gttgatcttcccgaaattatagttgctaccccactgcaacctcctatcttgtcatggaat
ctatacattccactcctcaaagtacttgaatatcttccacgggggagtccttcagaagca
tgcttgatgaaaatatttgttgccacagtggaaacaatactcagtagaacctttccgcct
gaatcatccagggaacataccagaaaagctagatcgagttttaccacaagatcagcgacc
aaaaatcttgttatggctgagcttcgtgctatggtccatgctctctttttagaatcatgc
gctggtgtggaattagcttcacgcctactttttgttgttttgactgtatgtgttagccat
gaagcacagtctagtggtagcaagagaccgagaagtgaatatgctatcactaccgaaaat
gttgaggcgaatcaacctgtatctgacaatcaaactgctaaccgtaaaagtaggaatgtt
aagggacagggacctgttgcagcatttgattcatacgttcttgctgctgtttgtgctctt
gcctgtgaggttcagctgtatcctatgatctctggaggggggagcttttccaattctgcc
gtggctcgaactattacaaagcctgtaaagataaatgggtcatctaacgagtatggagct
ggggttgactcggcaattaatcatacacgccgaattttggcaattctagaggcactcttt
tcattaaaaccatcttctgtggggactccatggagttacagttctagtgagatagttgct
gcggccatggttgcagctcatatttccgaactgttcagacgttcaaaggccttgacgcat
gcgttgtctgggttgatgagatgtaagtgggacaaggaaattcataaaagagcatcatca
ttgtataacctcattgatgttcacagcaaagttgttgcatccattgttgacaaagctgaa
cccttagaagcctacctcaagaatacaccagttcagaaggattctctgacctgtttaaac
tggaaacaacagaacacatgtgcaagcaccacacgctttgatacagcggtgacatccgcc
tcaaggactgaaatgaatcctagaggaaaccataagtatgctagacattcaggtgaaggc
tcagggagaccctcagagaagggtatcaaagatttcctcttggatgcttctgatctagcg
aatttcctcacagctgatagactcgcagggttctattgtggtacacaaaagcttttaagg
tcagtgcttgcagagaaaccggagctgtctttctccgttgtttcactgttatggcacaaa
ctgattgctgctcctgaaatccagcccaccgcagaaagcacctctgcgcaacaaggatgg
agacaggttgttgatgcgctatgcaatgttgtatctgcaacgccagcaaaagcagctgca
gcagttgttcttcaggctgagagggagttgcagccttggatcgccaaagatgatgaagaa
ggtcagaaaatgtggaaaatcaaccaacggatagtcaaagtgttggtggaactcatgcgc
aatcatgacaggcctgagtcactggtgattctggcaagtgcatcagatcttcttctgcgg
gcaactgatggaatgcttgttgatggagaagcttgtacattacctcaacttgagctactt
gaagccacggcaagagcaatacagccagtgctagcttgggggccatctggactagcagtt
gtcgacggtttatccaatctattgaagtgtcgtctaccagcaacagtacggtgcctttca
cacccaagtgcacacgtacgtgccttaagcatatcagtactacgtgacatcatgaaccaa
agctccatacccatcaaagtaactccaaaactgccaacaacagagaagaacggaatgaac
agcccgtcctatcggttcttcaacgccgccacaatagactggaaagccgatatccaaaaa
tgcttgaactgggaagctcacagcttgctctccacaactatgcctactcagtttcttgac
accgcagctcgagaactcggctgtactatatccttgtcccaataa
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integrated database retrieval system
