KEGG   Arabidopsis lyrata (lyrate rockcress): 9329347
Entry
9329347           CDS       T01578                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-1
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03010  Ribosome
aly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    9329347
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    9329347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:aly03011]
    9329347
   04121 Ubiquitin system [BR:aly04121]
    9329347
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aly04147]
    9329347
Ribosome [BR:aly03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    9329347
  Archaea
    9329347
Ubiquitin system [BR:aly04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   9329347
Exosome [BR:aly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   9329347
  Exosomal proteins of colorectal cancer cells
   9329347
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N Plexin_RBD DUF2604 UBL_UBAC1 TBK1_ULD CoV_NSP2_N Ubiquitin_5 Thioredox_PDIA6_C OTU1_UBXL
Other DBs
NCBI-GeneID: 9329347
NCBI-ProteinID: XP_020868824
LinkDB
Position
Unknown
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE
CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADEE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacaataaccctagaggttgaatcatca
gacacaatcgacaatgtgaaagcgaagattcaagacaaagaaggaatcccaccggatcag
caacggttaatcttcgccggaaaacaattggaagatggaagaacactcgctgattacaac
attcagaaagagtcgacgcttcatttggtgcttcgtctgagaggaggtgcgaagaagagg
aagaagaagacgtacacgaaacctaagaagattaagcataagcataagaaagtgaagcta
gcggttttgcagttttacaaggttgatggaagtggaaaagttcagaggttgaggaaagag
tgtccttctgttagctgtggtcctggaactttcatggcgagtcattttgatagacattat
tgtgggaaatgtggaactacttacgtgttcaagaaggctgatgaagagtga

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