Arabidopsis lyrata (lyrate rockcress): 9329374
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Entry
9329374 CDS
T01578
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
9329374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9329374
Membrane trafficking [BR:
aly04131
]
Endosome - Golgi transport
Others
AP-1 complex
9329374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_2
HEAT_GCN1
DUF8640
PDS5
Motif
Other DBs
NCBI-GeneID:
9329374
NCBI-ProteinID:
XP_020867765
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MNPFSSGTRLRDMIRAIRACKTAADERAVVRKECADIRALINEDDPHDRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHSNQY
VVGLALCALGNICSAEMARDLAPEVERLIQFRDPNIRKKAALCSTRIVRKVPDLAENFVN
AAASLLKEKHHGVLITGVQLCYELCTISDEALEYFRTKCTEGLIKTLRDMTNSAYQPEYD
VAGITDPFLHIRLLRLLRVLGQGDADASDLMTDILAQVATKTESNKNAGNAVLYECVETI
MAIEDTNSLRVLAINILGRFLSNRDNNIRYVALNMLMKAITFDDQAVQRHRVTILECVKD
PDASIRKRALELVTLLVNENNVTQLTKELIDYLEISDEDFKEDLSAKICFIVEKFSPEKL
WYIDQMLKVLCEAGKFVKDDVWHALIVVISNASELHGYTVRALYKAVLTYSEQETLVRVA
VWCIGEYGDLLVNNVGMLGIEDPITVTESDAVDVIEEAITRHNSDSTTKAMALVALLKLS
SRFPSISERIKDIIVKQKGSLLLEMQQRAIEYNSIVDRHKNIRSTLVDRMPVLDEATFNV
RRAGSFPASASTMAKPSVSLPNGVEKPVVAPLVDLLDLGSDDILATPSSSGPDFLQDLLG
VDLGASSSQPGATLAPRTGTDLLMDILSIGTPSPAQNSTSSVDLLSTADVNSNPSIALDT
LSSPAPPHVATTSSNGMFDLLHGLSPSPSKEATNGPAYPPIVAYESSSLKIEFTFSKAPG
NLQSTNVQATFTNLSPNTFTDFIFQAAVPKFLQLHLDPASSNTLPASGNGAITQNLRVTN
SQHGKKSLVMRMRIGYKLNGKDVLEEGQVSNFPRGL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttttcttctggtactcgtctaagggacatgatccgtgccataagagcatgt
aaaacagctgcggacgagcgtgctgttgtaagaaaagagtgtgccgatatccgagcatta
attaatgaagatgacccgcacgataggcaccggaaccttgcaaagctcatgtttatacac
atgttgggttacccgacacactttgggcagatggagtgcttgaagctaattgcatctcct
gggtttccagagaagaggattggatatcttgggttaatgttgcttcttgatgaaagacaa
gaagtgttgatgcttgtcacaaattcgttaaaacaagatcttaatcactcgaaccagtat
gttgtaggactggctctctgtgctttagggaatatttgttcagcggaaatggcccgtgat
cttgcgccagaagtagaaagattaatccagtttcgtgaccctaatatccgaaagaaggcg
gcgctttgctctacgagaatagtaaggaaagttccagatcttgcagaaaactttgtaaac
gctgctgcttccttgcttaaagaaaagcatcatggggttcttataacaggagttcaactt
tgttatgaattatgcacgattagtgatgaagccctagagtacttcagaacgaaatgcacg
gagggacttataaaaactttgagggatatgactaatagcgcatatcagcctgagtatgat
gttgcagggatcacagacccttttcttcacatacggttgctcaggctcctgcgtgtttta
ggccagggtgacgctgatgctagtgatttgatgactgatatacttgcccaggtggcaaca
aaaactgaatcaaacaaaaacgcagggaatgcagtactctatgagtgtgttgaaacaatc
atggccattgaagacaccaatagcttgcgtgtgcttgctatcaatatcttgggaagattc
ttatctaaccgcgacaataacatcaggtatgttgcattaaacatgctgatgaaagcaatc
actttcgatgatcaagcagtgcaaaggcacagagttacaattttggaatgtgttaaggac
ccagatgcttctatccggaaaagagctctggagcttgtcactcttttggtgaatgagaat
aatgtcacacaactgacaaaggagctaattgattatttggaaatcagcgacgaagatttt
aaggaagatcttagtgcaaaaatttgttttatcgtcgaaaagttttctccagaaaaacta
tggtacattgatcagatgctcaaggttctgtgtgaggctggaaagtttgtgaaagatgat
gtgtggcacgcgcttattgttgtcataagcaatgcatcagagcttcatggatatacagtt
agggcattatacaaagcagtcttgacgtattcggaacaggagacccttgttcgagtggcg
gtgtggtgcattggggaatatggcgatctgttggttaacaatgtggggatgcttggtatt
gaagatccaataacggtaacggaatcggatgcagtggacgttatcgaggaggccattact
cgccataactcagattcgactacaaaagcaatggcattggttgctctactgaagctgtca
tcccgctttccttctatatcagagagaattaaagacataattgtgaagcagaaaggaagc
cttctccttgaaatgcagcagagagctattgaatacaattctatagttgacaggcataaa
aatatcaggtctactctggttgacagaatgccggtactggatgaggctactttcaatgtg
aggagggccggctcttttcctgcatcagcttcaacaatggcaaagccttcagttagtctt
ccaaatggtgttgagaaacctgttgtagctcctcttgtggatttgctagacctaggttca
gacgatatcttggctacacctagttcatctggtccagattttcttcaggatcttctcggt
gttgacttaggagcatcgtcatcacaacctggtgcaacgttggctccgagaaccggcaca
gatctgttgatggatattctatcaattggaacaccttctcctgcacaaaacagcacatca
tctgttgatttattatcaacagctgacgtaaacagtaatccctcaattgcgctagacaca
ctttcttcaccagctccacctcacgtagcaacgacttcgtccaacggtatgtttgatttg
ttacatggtctttctccaagcccatcgaaggaagccaccaatggtccagcatatccacca
attgttgcatacgagagcagctccttgaagattgagttcaccttctcaaaggcaccaggg
aatctgcaatcgacaaatgtccaagctacttttactaatttatctcccaatactttcaca
gattttatattccaagctgctgttccaaagttcctccagctgcacttggatccagctagc
agtaacacactcccggcaagcggtaacggtgccatcacgcagaatctaagagtcactaac
agccagcacgggaagaaatcccttgtgatgcgcatgaggattgggtacaaactgaacgga
aaagatgtattagaggaaggacaagtcagcaacttccctcgcgggttgtga
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integrated database retrieval system
