Arabidopsis lyrata (lyrate rockcress): 9329401
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Entry
9329401 CDS
T01578
Name
(RefSeq) DNA topoisomerase 2
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9329401
03036 Chromosome and associated proteins [BR:
aly03036
]
9329401
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
9329401
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Topoisomerases
9329401
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
9329401
Centrosome formation proteins
Centriole proteins
9329401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
Motif
Other DBs
NCBI-GeneID:
9329401
NCBI-ProteinID:
XP_020870217
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MEYNDWLQEEEDEPYVEPPFDESVLTPEQKVKLDELHNEHPTLVRSDLAILIRLNLLSHR
AACEGREVTFYEEQEAHALKKVIYWVPPSELEGTCVSTLEIHDVEDIQMSCIEYVTSSLH
TSMIIDECFDLICESQRLDTLRAAKLARDYHEICFDIEYHCALNVHDLKFKFSMPEISRS
LLDESFLGVVLDIDKILHENEDPEVDYMDGDIVLYEINGDEVDYFVQPSCKQEIDFIFPP
NAFHPHEHSTIKEYFKAIGARAGFGASCARLSLFGAKTMEKRYKRSPGAGDRSIQGVDRS
IPIVTMKPKPPTIEEMYQEKSLHEHILLRPDAYIGSIKEHTQPLWVFEKGEMVYRRTTYV
PGLCKIFEEILMNAVDNKRTDPSMDSIIVKIDVDQNTISVRNNGNGVPVAQLEEKNVYIP
ELVFGCLLTSSHFDDNTTGGRTGYGAKLTNIFSTRFTIETNLNRYEHEKIVFTRNMKEKS
TPVVTTCESIDKWTEVTFEPDLEMFHISKIGKDTVALMEKRIVECAACLGETVKVTINDT
LLEVNSFNDYVDLYLGANSSRNDPLPRMTVKVNDKWEICVSLSKDKFQQISFVNSIATTK
GGPHVDYVTTQIIDFITNSVKKKMNYAKVETDNVKKHMWVFVNCVIDHPVFDWLKETLIF
PESSFGSKCKLSKDILKKDENPGMVKQLLSWATSKHGKDLDLGIEKLVDANKAGGEDSKL
CTLILTEGDSAKTLVMTGLSFLSDESRELYGVFPLQGKLMNVRGASEDKINKNKKIQQLK
TILGLENGKEYGNLRYGHVMIMTDQDHDGFHIKGLIINLFHVMWPELLERDPSFLCEFVT
PIVKATHEDGKKETFFSMPELKKWKNNLLPNDIPRWTYKTYKGLGTSSDEEAQTYFENIS
IHKRDFLWQNEDDGKAIDLAFNSDKPEDRRTWLKNYRSDTHLDRYSEFINKELILFSKED
NRRSIPEMIDGLKPGQRKTLFCSLARDWKTECKVSVLTAHAIDRSDYNHGEQSLASTIIK
MAQDYVGSSNVNLLLPMGQFGSQIFGGQDAASARYLYTMISPATRALFHKDDDVLLAWMD
GDNQRMIEPKWYIPIIPTVLVNGCEGIGTGWSTFVPKYSTKDVIKNIMRLMSGEALEPMV
PSYRGFKGTITETEGGFITKGVFEKNIQNSTIRITELPIKHLSNYKKFLHVLKTEEKFIK
EIRDNSSRSSIDILLTLSRENMEIADEDIYTKLKLRTKILTTNMNLFDPTSQEEIKKYGS
PLDSKINSVFLRLEIY
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggaatataatgattggctacaagaagaagaggatgagccatatgtggagccaccattt
gatgagagtgttcttacaccggaacaaaaagtgaagttggatgaacttcacaacgaacat
ccgacattggtaaggagtgatttagcgattttgatccggttgaatctcttatcacaccgg
gcagcatgtgaaggaagagaagtcacattctatgaagaacaagaagctcatgcgcttaaa
aaggtaatatattgggttccaccaagcgaactagaaggtacatgcgtttcaacccttgaa
attcatgatgttgaggatattcaaatgtcatgcattgaatatgtgacttctagtttgcat
acttccatgatcattgatgaatgttttgatttgatatgtgagtctcaacgactagatact
ttaagagcagcaaaacttgctagggattaccatgaaatatgttttgatattgaatatcat
tgtgctttgaatgttcatgatctcaagtttaagttttcaatgcctgaaatatctagatct
cttcttgatgaatctttcctaggagttgtgcttgatattgataagattttgcatgagaat
gaagatcctgaggttgattatatggatggagatattgtgctatacgagattaatggcgat
gaagttgattattttgttcaaccctcgtgtaaacaggaaattgactttatttttcctcca
aatgcatttcatcctcatgagcattcaaccatcaaggaatatttcaaagctataggtgct
cgagctggattcggagcatcttgtgcacgattgagcctattcggagctaaaacaatggag
aaacggtacaagagatcaccaggagctggggatcgatcgatccaaggcgtggatcgatcg
atcccaattgtgacgatgaagccaaaaccccctacgatcgaagagatgtatcaggagaag
tcgctgcatgagcacattttgctccgtcctgacgcgtacataggttcgattaaggagcac
acccagccgctctgggtatttgaaaagggcgagatggtttaccggcgaacgacttatgtc
cctggcctttgcaaaatctttgaggagatactcatgaatgcggttgacaataaacgtaca
gatccgtctatggattctatcatcgtgaagatcgatgttgaccagaatacaatcagcgtc
cgtaacaacggaaatggagttcccgtggcgcagcttgaggagaaaaatgtttatatccct
gaattggtttttggttgtctcttgaccagtagtcactttgatgacaataccactggtggc
agaaccggatatggcgccaagctcaccaacatattctccactagattcaccattgaaaca
aatttaaacaggtatgaacatgaaaaaatcgtgttcacacgaaacatgaaagaaaagtca
actcccgttgtgaccacatgcgaatccattgataaatggacagaggttacatttgaacct
gacttggagatgtttcacataagtaaaattggtaaggatacagtagctctaatggaaaaa
cgaatagtagagtgtgctgcgtgtttgggagagactgtgaaagtaaccattaacgacaca
ctacttgaagtaaactcattcaatgattatgttgatttataccttggagccaatagttca
aggaatgatcctctaccaaggatgactgtgaaagtaaatgacaaatgggagatatgtgtg
agcttaagtaaggacaagtttcagcagattagctttgtcaactccatagccacaaccaaa
ggtggtccacacgtcgattatgtgaccactcaaatcatagatttcattactaattctgtg
aagaaaaagatgaactatgctaaagtggagacggataatgttaagaaacacatgtgggtg
tttgtcaattgtgttattgatcatccagtctttgactggctgaaggaaacattgattttt
ccagagagcagttttgggtcgaaatgcaaactttcaaaagatattctcaagaaagatgag
aatcctgggatggtaaagcagttgctttcatgggcaacttccaagcatggcaaagatctt
gacctaggcatcgaaaaattagttgatgctaacaaagcaggaggggaagactccaaactc
tgcacattgattctaacagagggggattctgcaaagactctcgttatgacggggttgtct
ttcctgagtgacgagtcacgtgaactctacggtgtgtttcccctccaaggaaagttgatg
aatgtgaggggtgccagtgaagataaaataaataaaaacaagaaaattcaacagttaaag
actattctcggattagagaatggaaaggagtatggcaatctaagatatggccatgtcatg
atcatgaccgatcaggatcacgatggatttcatattaaaggtctaataatcaatttattc
catgtaatgtggccggagttactcgaaagggatccatccttcctatgtgagtttgtaaca
ccaatagtgaaggctacgcacgaggatggaaaaaaagagacatttttctcaatgcctgag
ttaaaaaaatggaaaaataatctcttacctaatgatataccaagatggacctacaaaacc
tacaagggtttgggtacaagttcggatgaggaagcacagacctattttgaaaatattagt
attcacaaaagggatttcctctggcagaatgaagatgatggaaaagctatcgatttagca
ttcaatagcgataagccagaagatcgaagaacttggctcaagaactatcggtctgacaca
caccttgaccgttactctgagtttatcaacaaagaactcatcttgttctccaaagaagac
aatcgaaggtccattcccgagatgattgatgggcttaaaccgggccagagaaagacgctc
ttttgttcattggctagagattggaagacagaatgcaaagtctctgtattaacggctcat
gcaatagataggtcggattacaaccatggagaacaaagccttgccagtaccatcatcaag
atggcacaagattatgttggcagcagcaatgttaatctccttttaccaatgggacagttt
ggctcgcaaatttttgggggacaagatgcagcaagtgcaagatacctttacactatgatc
tctccagctacaagagccttgtttcacaaagatgatgatgtccttcttgcctggatggat
ggagacaatcaaagaatgatagagccgaaatggtacatacctatcattccaactgtcctt
gtcaatggatgtgaagggattggaactgggtggagtacattcgtcccaaaatatagcact
aaagacgttataaaaaacataatgcggctaatgagtggtgaggctcttgagcctatggtt
ccatcttatagaggatttaaaggaacgatcacggaaacagaaggtgggttcattacaaaa
ggtgtattcgagaagaacattcaaaactcaaccatccgcatcaccgagctacctatcaag
catctgtcgaattacaagaagttcttgcatgtcttgaagacagaagaaaagtttatcaag
gaaataagggacaatagtagtcgatcaagtatagatattctgctgacattgagtagagaa
aacatggagattgctgatgaagacatttatacaaagctcaaactcaggacaaaaatcctc
acaacaaatatgaacctcttcgatcctacttcccaagaagaaataaagaaatatggaagt
ccacttgatagtaagattaattctgtttttcttcgccttgaaatttactaa
DBGET
integrated database retrieval system
