Arabidopsis lyrata (lyrate rockcress): 9329594
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Entry
9329594 CDS
T01578
Name
(RefSeq) syntaxin-61 isoform X1
KO
K08500
syntaxin of plants SYP6
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
9329594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9329594
Membrane trafficking [BR:
aly04131
]
SNARE
SNAP-25[C] (Qc)
STX6
9329594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
DUF3394
PIN-TPR-GreABC
CCDC-167
Motif
Other DBs
NCBI-GeneID:
9329594
NCBI-ProteinID:
XP_020869994
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDEL
EKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRE
LMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTI
HDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFV
LVFLT
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgctcaagatccattctacattgttaaagaagagatccaggattctattgat
aagttgcaatcaacattccacaaatgggagcgtatctctcccgacatgggggatcaagcg
catgtggcgaaggagcttgttgctacttgtggaagcattgagtggcaggtagatgagctg
gaaaaggcgattactgttgcagctaaagatccttcatggtatggtattgatgaagctgag
cttgaaaaacggaggagatggactagtaatgctaggacacaggtgcggaatgtgaagtct
ggtgttttagctggaaaggttagttctggagctggtcatgcaagtgaagtgcgcagagaa
ctgatgagaatgccaaactcgggtgaagcaagtagatacgatcagtatggagggagagac
gatgacggttttgtacagtcagaatcagataggcaaatgctgttgataaagcaacaagac
gaagaattggatgagctcagtaaaagtgtacagagaattggaggagtggggctcactata
cacgacgaactcgttgcacaggagagaataatagatgaattggatacggagatggacagt
acaaagaaccggctggagtttgttcagaaaaaagtgggaatggtaatgaagaaagctgga
gcaaaaggtcaaatgatgatgatatgtttcttgctcgtcttgttcatcatcctattcgtt
cttgtcttcttgacctaa
DBGET
integrated database retrieval system