Arabidopsis lyrata (lyrate rockcress): 9329911
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Entry
9329911 CDS
T01578
Name
(RefSeq) protein argonaute 2 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9329911
03036 Chromosome and associated proteins [BR:
aly03036
]
9329911
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9329911
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9329911
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9329911
microRNA pathway
RISC loading complex
9329911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9329911
NCBI-ProteinID:
XP_002893850
UniProt:
D7KL30
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MERGGYRGGRGDGRGRGGGGGGRGYGGGGGGGGGGEQGRGRGYGGGGGEQGRGRGSERGG
GNRGQGRGEQQDFRSQSQWGPPPGHGGRGTQSQQPRPQVVPQPSQAPVSYAGSVGGVAGR
GAWGRRPQVSSDSASPSTTVVVSEPVRVAEVMNPRPSVQVVSSDRKEPMKRPDRGGVVAV
RRVNLYVNHFRVNFDPESVIRHYDVEIKGENPTKKISRFELAMVRDKVFTDNPNEFPFAM
TAYDGQKNIFSAAELPTGSYKVEFPKTEEMRGRSYTFTIKQVNELKLRDLKEYMTGGSSC
NPRDVLQGMDVVMKEHPSKCMITVGKSFFTRETERDEDFGFGVAAAKGYRHTLKPTAQGL
SLCLDYSVLAFRKAMSVIEYLKLYFNWSDMRQFRNCRRDVEKELTGLKVTVNHRKNKQKL
TIVGLSMQDTKDIKFDLIDQEGNEPPRKTSIVEYFRIKYGRDIVHKDIPCLDLGKNGRQN
FVPMEFCDLVEGQIYPKDDLDKDSALWLKKLSLVNPQQRQRNIDKMIKSRNGPSGGEIIG
NFGLKVDTNMTPVEGRVLKAPTLKLAERGRAVREEPNPRQNNQWNLMKKGVTRGSIVKHW
AVLDFTASERFNRMPNDFVDNLIDRCWRLGMQMEAPIVYKTSRMETLSNGNALEELLRSV
IDEAFRKHDGARPTLVLCAMSRKDDGYKTLKWIAETKLGLVTQCFLTGSATKGGDQYWAN
LALKMNAKVGGSNVELMDTFSFFQKEDEVMFIGADVNHPAARDKMSPSIVAVVGTLNWPA
ANRYAARVIAQPHRKEEIQGFGDACLELVKAHVQATGKRPNKIVIFRDGVSDAQFDMVLN
VELLDVKLTFEKNGYNPKITVIVAQKRHQTRFFPATSNDGSDKGNVPSGTVVDTKVIHPY
EYDFYICSHHGGIGTSKPTHYYTLWDELGFTSDQVQKLIFEMCFTFTRCTKPVSLVPPVY
YADMVAFRGRMYHEASSREKNFRQPWGASTSAASLASSLSSLTVEDKAIFKLHAELENVM
FFV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggagagaggtggttatcgaggtggtcgtggtgatggccgtggtagaggcggcggagga
ggaggccgtggctatggcggcggcggaggaggaggaggaggaggagaacaaggtcgtggt
cgtggctatggcggcggaggaggagaacaaggtcgtggtcgtggctcagagcgtggcggt
ggaaatcgtgggcagggacgtggtgaacagcaggattttcgtagccagagtcagtgggga
cctccgccaggtcacggtggtcgtggtacgcagtcgcaacaacctcgaccacaggtggtt
ccgcagccgtcgcaggctccggtgagttatgctggttcggtaggaggagtcgctggtaga
ggcgcgtggggtcgtaggccacaggtttcttctgattcggcttctccgtccaccaccgtc
gtggtttctgagcccgttcgtgtagctgaagttatgaatccgaggccatcggtgcaagtt
gtgtcttctgataggaaagaaccgatgaagcgacctgatagaggcggtgttgtggctgtg
cggcgggttaatctctatgtgaatcattttagagtgaatttcgatccggaaagtgtcata
agacattatgatgttgaaatcaaaggagaaaatcctacgaagaagatttcgaggtttgag
ctagctatggttagggacaaggtgttcactgataatcctaatgagtttcccttcgctatg
acagcttatgatggtcagaagaacattttcagcgcagctgaattgcctacaggttcatat
aaggtggagttccctaaaactgaagagatgagaggtcgaagctatacattcactatcaaa
caggtgaatgagcttaagctacgcgacttgaaagagtacatgacagggggttcgtcttgc
aatccgcgtgatgtgttgcaaggaatggatgttgtgatgaaggagcatccttcaaagtgt
atgatcactgttggtaaaagctttttcactcgtgaaactgagcgagatgaagactttggc
ttcggggttgcagctgcgaaagggtatcgccacactctgaagcccacagcacaaggtttg
tctttgtgtttggactactcagtgttggcgttccgcaaagcaatgtcggtcattgaatac
ctgaagttgtactttaactggtccgatatgcgtcagtttaggaattgtaggcgtgatgtg
gaaaaggaactgactggtttgaaagtcactgtgaatcatcggaagaacaagcagaaactc
accattgtagggctgagtatgcaagacacaaaagacatcaaattcgatcttattgatcaa
gagggaaacgagccaccaaggaaaacgtccattgttgagtatttcaggataaagtatgga
agagacattgttcacaaagatattccttgcttggatttggggaaaaacggtaggcaaaat
tttgtccccatggagttctgcgacttggttgagggacagatttatccaaaggacgacttg
gataaagattcagctttgtggttaaaaaagttgtcgctagtcaatccacaacaaaggcag
aggaatatagataagatgataaagtctcgtaatggaccgagcggtggagaaataattgga
aacttcggattgaaagtggatacaaacatgacaccggtggaaggtcgtgtactcaaggct
ccaacattgaagttggcagagagagggagagctgtgcgtgaggaacccaacccaagacag
aacaaccaatggaaccttatgaagaagggagtcacaaggggatctatagtcaagcattgg
gctgtacttgacttcaccgcatccgagagatttaacaggatgcctaatgactttgtggat
aacctcatcgaccgttgttggagacttgggatgcagatggaggctcctatagtttacaaa
acatcgagaatggaaacactttctaatggtaatgctcttgaggaattgcttcgatccgtg
atagatgaggcttttcgtaagcatgatggggctcgtccaactcttgttctgtgtgctatg
tctcggaaggacgatggctacaagactctgaaatggatagccgagaccaaacttggtctt
gtgactcagtgtttcttgaccggttctgccactaaaggaggtgatcagtactgggcaaat
cttgccctcaagatgaatgcaaaggttggtggaagcaacgttgagttgatggatacgttc
tcttttttccaaaaagaggatgaggtcatgttcattggtgccgatgtcaatcatcctgct
gctcgggacaagatgagcccgtctattgttgctgttgtgggtactctaaactggcctgca
gctaaccgttatgcagctagagtcattgcccagcctcaccgtaaagaggagatacaagga
tttggcgatgcttgcctggagcttgtcaaagctcatgttcaggccaccgggaaacgacct
aacaagattgtgatattccgtgatggtgtcagcgacgctcagttcgatatggttctcaat
gtggagttgcttgatgttaagctgacttttgagaagaatggttacaatccaaagataacg
gtaatcgtagcccagaaacgccatcaaacccgtttcttccctgccacaagcaatgatgga
agtgataaaggcaatgtgccttcaggtacggtcgttgatactaaagtcattcacccatat
gagtatgatttctacatctgcagtcaccatggagggatcgggacaagcaaaccgactcat
tattacactctttgggacgaacttggattcacttcagatcaggttcagaagctcatcttt
gagatgtgcttcactttcactcgctgcaccaaacctgtctctcttgttcctccggtgtat
tatgctgacatggttgcctttagaggaaggatgtaccacgaggcaagctctcgagagaag
aactttaggcagccgtggggagcgtctacctcagctgcttcgcttgcctcttcattatct
tctcttacagttgaggacaaagcgatattcaagctgcatgcagagcttgagaacgttatg
ttcttcgtctga
DBGET
integrated database retrieval system
