Arabidopsis lyrata (lyrate rockcress): 9330172
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Entry
9330172 CDS
T01578
Name
(RefSeq) protein argonaute 1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9330172
03036 Chromosome and associated proteins [BR:
aly03036
]
9330172
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
9330172
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
9330172
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
9330172
microRNA pathway
RISC loading complex
9330172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
9330172
NCBI-ProteinID:
XP_020868366
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MVRKRRTDAPSAGGEASGSREAGPVSGGGRGSQRGGFQQGGGGGQQQGGRGYTPQSQQGG
RGGRGYGQPPQQQQQYGGPQEYQGRGRGGPPHQGGRGGYGGGRGGGPSSGPPQRQSVPEL
HQATSPTYQAVSSQPTLSEVSPTQVPEPTVLAQQLEQLSVEQGAPSQAIQPIPSSSKAYK
FPMRPGKGQSGKRCVVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMKQLVDSYRE
SHLGNRLPAYDGRKSLYTAGPLPFTSKEFRINLLDEEEGAGGQRREREFKVVIKLVARAD
LHHLGLFLEGKQPDAPQEALQVLDIVLRELPTSRNRYTPVGRSFYSPDIGRKQSLGDGLE
SWRGFYQSIRPTQMGLSLNIDMSSTAFIEASPVIKFVCDLLNRDISSRPLSDADRVKIKK
ALRGVKVEVTHRGNMRRKYRISGLTAVATRELTFPVDERNTQKSVVEYFHETYGFRIQHT
QLPCLQVGNSNRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPLEREKDILRTV
ELNNYKEDPYAKEFGIKISTSLASVEARILPPPWLKYHESGREGTCLPQVGQWNMMNKKM
INGGTVNNWICINFSRQVQDNLARTFCQELAQMCYVSGMAFNPEPVLPPVSARPEQVEKV
LKTRYHDATSKLSQGKEIDLLIVILPDNNGSLYGDLKRICETELGIVSQCCLTKHVFKMS
KQYMANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAA
VVASQDWPEITKYAGLVCAQAHRQELIQDLFKEWKDPQKGVVTGGMIKELLIAFRRSTGH
KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEAGYQPPVTFVVVQKRHHTRLFAHN
HNDRHSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTAD
GLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGG
MAGRNTRGPNINAAVRPLPALKENVKRVMFYC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaaagagaagaacggatgctccatctgcaggaggtgaagcctctgggtctcgt
gaagctggtccagtctcaggtggtggacgtggttcacaaagaggtggtttccagcaggga
ggtggaggaggacaacagcaaggtggaagaggttatactcctcagtctcaacagggaggt
cgtggtggtcgtggatatgggcaaccaccacaacagcaacagcagtatggtggtccacaa
gagtaccaaggaagaggaagaggaggacctcctcatcaaggaggtcgaggagggtatggc
ggtggccgtggaggtggaccttcttctggaccaccgcagagacaatcagttcccgagctg
catcaagctacctcacctacttatcaagcggtgtcttctcagcctacactgtctgaggtg
agtcctacccaggtgccggaacctactgttctggctcagcaattggaacagctctctgtt
gaacaaggagctcccagtcaggcaatccagcctataccttcttctagcaaggcttacaag
tttccaatgaggcctggtaaaggacagagtggaaagcgttgcgttgtgaaggctaaccat
ttctttgctgaactgcctgataaggatttgcaccagtatgatgtaaccattactccggaa
gttacatcaaggggtgttaatcgcgctgtgatgaaacaacttgttgatagttatcgtgaa
tctcaccttggaaatcgtcttcctgcctatgatggtcggaaaagtctgtacactgctgga
ccacttccgtttacttccaaggagttcagaatcaatcttcttgatgaggaagaaggggcg
ggaggacaaagacgagaaagggaattcaaagttgtgatcaagctagttgcacgtgctgat
ctgcatcacctaggattgtttttggaggggaaacaaccagatgccccacaggaagctctg
caggttcttgacattgttcttcgtgagctgccgacctctagaaacaggtatactccggtg
ggccggtccttttattcccctgatataggaagaaagcaatctttgggggatggcttggag
agctggcgtggattctaccaaagcattcgtcctacacagatgggcttatcactcaatatt
gatatgtcatcgacagcattcatagaggcatcccctgtgattaagtttgtctgtgatttg
cttaaccgggatatttcatctcgacctttatctgatgctgatcgtgttaagataaaaaag
gctcttagaggtgtcaaggttgaagtgactcatcgaggaaacatgcgccggaagtaccgt
atttctggcttgactgctgtggccactcgggaattgacattcccagtagatgaacgaaat
actcagaaatctgttgtagaatacttccacgaaacatatggttttcgcattcagcacact
caactaccatgcttgcaagttgggaattctaacaggccaaattacttaccaatggaggta
tgcaagattgttgaaggccagcgatattcgaaaagattgaatgagagacagatcactgct
ttgctgaaggttacctgtcagcgccccctagaacgagaaaaagatatcttacggacggta
gaactcaataattataaggaagatccctatgctaaggagtttggcatcaaaataagtacg
tctctggcttctgttgaggctcgaatactgcctccaccatggcttaagtaccacgagtct
ggaagggaagggacttgtctgccacaagttggtcaatggaacatgatgaataagaaaatg
atcaatggtggaacggtgaataattggatctgcatcaacttttctaggcaagtgcaggac
aatctagctcgtacgttttgtcaggaacttgctcaaatgtgctatgtatctggcatggcc
tttaatcctgaaccagtcctcccaccagtcagtgctcgccctgagcaagtagagaaggtc
ttgaagacgagatatcatgatgccacctcaaaactctcccaaggaaaggaaattgatctg
cttattgtcattcttccagacaataacggatcattatatggtgatttaaaacgcatatgt
gagactgaacttggcattgtctctcaatgctgcctgacaaaacatgtctttaagatgagc
aaacaatacatggctaatgttgcgctgaagattaatgtgaaggttggaggaaggaataca
gtgcttgttgatgctttatcaaggcggattccactagtcagtgatcgacccaccattata
tttggtgctgatgttacccatcctcaccctggagaggattcaagcccatctattgctgct
gttgtggcatcccaggattggcctgaaatcactaaatatgctggattagtttgcgctcaa
gcgcataggcaggagctcattcaggatctgttcaaagagtggaaggatcctcagaaaggg
gtggtgactggtggcatgataaaggagttactcatagccttccgtagatcaactgggcat
aaaccgctaaggatcatcttctacagggatggagtcagtgaaggacaattttaccaagtt
ttactctatgaacttgatgctatccgcaaggcctgtgcttcgctggaagctggttatcag
ccaccagtgacatttgtggtggtgcagaagcgccatcacacgaggctgtttgctcacaac
cacaatgatcgtcattcggtggacagaagtgggaatatcttacctggcactgttgtggac
tctaaaatctgtcaccctaccgagtttgacttttacctctgtagtcatgctggtatacag
ggaacttctcgaccagctcattaccatgttctttgggatgagaacaactttacggcagat
ggacttcaatctctgaccaataacttatgttacacgtatgcaagatgcacacgatcagtt
tcaattgtgccgcctgcatattatgcacatctagcagcttttagggctcgattctacatg
gagccggagacatcagacagtggttcgatggctagcgggagcatggcacgtggaggtgga
atggctggtagaaacacacgtgggcctaacatcaatgctgcagtgaggccactcccagca
ctgaaagagaatgtgaagcgtgttatgttctactgctga
DBGET
integrated database retrieval system
