Arabidopsis lyrata (lyrate rockcress): 9330316
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Entry
9330316 CDS
T01578
Name
(RefSeq) formate--tetrahydrofolate ligase
KO
K01938
formate--tetrahydrofolate ligase [EC:
6.3.4.3
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00670
One carbon pool by folate
aly01100
Metabolic pathways
aly01200
Carbon metabolism
aly01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
9330316
Enzymes [BR:
aly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
9330316
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Paralog
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Motif
Pfam:
FTHFS
CbiA
Motif
Other DBs
NCBI-GeneID:
9330316
NCBI-ProteinID:
XP_020867277
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MSSSSRKLEVVSPVPADIDIANSVEPLHISEIAKDLNINPLHYDLYGKYKAKVLLSAFDE
LQGQEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCLRQPSQGPTFGIKG
GAAGGGYSQVIPMDEFNLHLTGDIHAITASNNLLAAAIDTRIFHETSQSDKALFNRLCPP
NKEGKRSFSDIMFRRLTKLGISKTSPEELTPEEIKKFARLDIDPASITWRRVMDVNDRFL
RKITIGQGPEEKGMTRETGFDISVASEIMAVLALTTSLGDMRERLGKMVIGNSKAGDPIT
ADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGP
GGFVVTEAGFGSDIGTEKFMNIKCRYSGLTPQCAIVVATVRALKMHGGGPDVVAGRPLDR
AYVNENVSLVEAGCVNLAKHISNTKAYGVNVVVAVNMFSTDTEAELNAVRKFSMDAGAFD
AVVCSHHAHGGKGAVDLGIAVEKACQNITQPLRFLYPLDISIKDKIEAIAKSYGASGVEY
SDQAEKQIEMYTQQGFSNLPICMSKTQYSFSHDASKKGAPSGFVLPIRDVRGSIGAGFIY
PLVGTMSTMPGLPTRPCFYEIDIDTETGKVRGLS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcatcaagaaagcttgaggttgtttcaccagttccggccgatatcgatata
gctaattccgtggagcctttacacatctctgagattgccaaagatcttaatatcaaccca
cttcactacgatctctatggcaagtataaagctaaggttttgttgtctgcgtttgatgag
cttcaaggacaagaagatggttactatgttgttgttggagggattactcctactcctctt
ggagaaggcaagagtactaccactgttggactttgccaagccttaggcgcttaccttgat
aagaaggttgttacttgtcttcgccaaccgtcacaaggacccacctttggaatcaaagga
ggtgcagctggtggtgggtatagtcaggtcattcctatggatgagttcaatcttcatctc
actggagatattcacgcgatcaccgcttccaacaatctcttagctgctgcaatcgacact
cggattttccatgagacgtctcaatccgacaaggctctttttaataggttgtgccctccg
aataaagaagggaagcgtagtttcagtgacattatgttcaggagattgacaaagcttggg
atctccaagaccagtcctgaggagcttactcccgaggagataaagaaatttgctaggctt
gatattgatcctgcttctatcacgtggagaagagttatggatgttaatgatcggttcttg
aggaagattactattggtcagggacctgaggaaaaggggatgactagagaaactggtttc
gacatttctgttgctagtgagattatggctgttttggctttgacaacctctctaggtgat
atgagagagaggctaggtaaaatggtgattggaaacagcaaagccggggatccgataaca
gcagatgatcttggtgttggaggagccttgactgttctgatgaaagacgctattaaccca
acactaatgcagacactggaagggacacctgtccttgttcatgctggtccttttgcaaac
atagctcatggaaattcatcgattgttgctgataaaatcgctttgaagctggtgggacct
ggtggatttgtggtaacagaagcgggttttggttctgatattggaacagagaagttcatg
aatattaagtgccgctacagcgggctaacgcctcagtgtgcgattgttgtggcgactgtt
agggccttgaaaatgcatggtggtgggcctgatgttgttgcagggaggccacttgatcgt
gcttatgtaaacgagaatgtttccttggttgaagctggctgtgtgaatctggcaaagcac
atctcaaacacaaaggcctacggtgttaatgtagttgttgctgtgaatatgttctcaaca
gacaccgaagcagaactaaatgcagttaggaaattttcaatggatgccggtgcttttgat
gctgtggtctgctcccaccatgctcacggtggcaaaggagcggtggatcttggtatcgcg
gttgaaaaagcttgtcaaaacattacacagccacttaggtttctctacccattggacatt
agcatcaaagacaaaattgaggccatagctaagtcatatggagccagtggtgttgaatac
tcagaccaggcagagaaacagattgagatgtacacacaacaaggcttctcgaatcttccc
atatgcatgtcgaaaacacagtactcattctcgcatgatgcatcaaagaaaggagcacct
tcagggtttgtgttaccaataagggatgtaagaggaagcattggagctggtttcatatat
ccactggttggtacaatgagtaccatgcctggacttcctacaagaccttgtttctacgag
attgatattgacactgaaactggaaaagttcgtggcctttcttaa
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