KEGG   Arabidopsis lyrata (lyrate rockcress): 9330335
Entry
9330335           CDS       T01578                                 
Name
(RefSeq) UPF0505 protein isoform X1
  KO
K25731  VPS35 endosomal protein-sorting factor-like
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aly04131]
    9330335
Membrane trafficking [BR:aly04131]
 Protein recycling
  Others
   Retriever complex
    9330335
SSDB
Motif
Pfam: Vps35
Other DBs
NCBI-GeneID: 9330335
NCBI-ProteinID: XP_020868718
LinkDB
Position
Unknown
AA seq 905 aa
MELEFRRRDYGATHESQFLPRSEALKHPLSSIFASRQQQAKTVRGSDLDFFDPLRGLDVN
ASAEEKVEDTSISIEAVTQDLIKEWKSLKRVLMQRFPVSKVISFSPISNIIMKGSKAVEA
PSALSHSEETGSEQTSLEEPAKIINQQEYIAKVHELREGIKCAWQAEDRVTSLKLSIKVT
KLLMDTTVLQFYPTVFVIVTDMLDMLGDMVWERIKQKAELDVDGTVICSLLNDFQSSDIC
LEARETCYNWFCKVGSVRELLPRIYLELAIMPCWRFLINQPMEVLDRLVMMVRGLADPLA
SLYCRLYMVHRMQKFGFCNSGYLIKCIKDIEDVLAPVLVDKEGYSYITDDKKLLFSLMEP
AIEYIVKCLFLTGRQENNVLSMLEELGFGRNKFQSSCNSSHVSILLHHLLKELPSELVIS
LTTEILDMIKCSNDCSFSQVLNYRLLGNKLSEGKSQEGFLSSLIDEVIQAASQYQSLYDY
LRIMDAYVDLMLQNKMENHLDALLDDIVNLARDKFLCEEEQASLQSIILKLLAHFENLQE
VLPLNHFIEILDLMSGTSKSSVNMHLLNMGTRNGCICDSTTVQFLFEVSQALYDATDFVH
IKDDDNRQTSHLISRFVEMVDYGAEMERHLMFLAECREAFNGIHELKETLVRSSNTLAVK
ALKAGKKHTNFVKSCLAFSEVTIPSISSPTKHLNLYLETAEVALLGGLISHSDGLVMSAV
EYLENVAVTDGLKLIDVDSMASVVCKLCSLLVMVPGNPEKGVMEILKSIFSATCSSSWAT
PRLKVKIFCAIMSLLSTLSQDNLPYHSANPEIIGNDLLFFGDSSYKQELVSCSQFVLSEL
LDAIEQESSQIARGNMAIEACNCISLALVMNEKVTELCLRLLETAKGCLGANDRYIESTK
KSLQL
NT seq 2718 nt   +upstreamnt  +downstreamnt
atggagttggaattccggcgtcgcgactatggagctacacatgaatctcaatttcttcct
cggtcagaagctctaaagcatcctctttcctctatatttgcttctcgtcaacaacaggct
aaaactgtcagaggtagcgatcttgacttctttgatccgttgcggggattggatgtgaat
gcttctgcagaagagaaggttgaagatacttctatatccattgaagctgtaactcaggat
ctgataaaggagtggaaatcacttaaaagagtcttaatgcagcggtttcctgtctccaaa
gtgatttcattttctccaatatctaatataataatgaaaggttccaaagcagttgaggcc
ccttctgctctttcccattcggaggaaaccggtagcgaacaaacttctctggaagagccg
gccaaaataatcaaccaacaggaatatatagccaaagtgcatgagctaagagagggaatt
aaatgcgcttggcaggctgaagatcgagtaacatcgttgaagttatcaataaaggtcaca
aaacttctgatggatacaacagttttgcagttttatcctacagtctttgtcattgtcact
gacatgctagatatgcttggggatatggtgtgggaacggatcaaacagaaagcagaactt
gatgtagatggaacagtgatctgctccttactgaatgattttcaatcaagtgatatctgc
cttgaagcaagagagacttgctataactggttttgcaaagttggttctgttcgagaactt
ctccctcgcatttatctggagcttgcaatcatgccttgctggcgtttcctcattaatcaa
cccatggaagttcttgatcgtttagtcatgatggtgagaggtctcgcagatccactggca
tctttgtattgtcgcctttatatggtgcatcgcatgcagaagttcggcttctgcaattct
ggatatttaatcaaatgcatcaaggatattgaagatgtattagcacctgttttagtggac
aaggaggggtattcctatattacagacgacaaaaagttgctttttagtttgatggaacca
gccatcgagtatatagtgaaatgcttatttctaactggacgtcaggagaacaatgtcttg
agcatgcttgaggagcttggatttggaaggaacaaatttcagtcatcttgcaactcttcg
catgtgtccattttacttcatcatctactcaaggaacttccatctgaattagttatttca
ctaactacggagatcctggatatgattaaatgcagcaatgattgttcctttagtcaggtt
ttgaattataggttattgggaaataaactgtctgaagggaaatctcaagaaggttttctc
agttcactcattgatgaagttattcaggccgcttctcagtatcagtcactgtatgactac
ttaagaattatggacgcatatgtggatcttatgttgcagaacaagatggaaaatcatctg
gatgctctcttggatgatattgtaaatctagctcgtgacaagtttctttgtgaagaagaa
caagcaagtttgcaatccataattttgaagctgctcgctcatttcgagaacttgcaagaa
gtacttcctctgaatcatttcatcgagattctggatcttatgtctgggacttcaaagagc
agtgtaaacatgcatcttcttaacatgggtacaaggaatggctgcatttgtgattcaaca
acagtgcaatttctttttgaagtttctcaggctctttatgatgctacagatttcgttcac
ataaaggatgatgacaatagacagacatcacatttaatttctcgttttgttgagatggtt
gactatggggcagaaatggaacgccatttgatgtttttggcggagtgtcgtgaggccttt
aatgggatacatgaacttaaggaaacacttgtccgttcaagcaacaccttagcagtaaaa
gcactgaaagcaggaaagaagcataccaactttgtaaaatcttgcctagcatttagcgaa
gtgaccatcccctctatttcatctcccacgaaacacttaaatctttatcttgaaactgca
gaggttgcacttttaggtggtttgatttctcattcagatggactggtcatgtcagctgtt
gagtatctagagaatgtagcggtaacagatggtttaaaattaattgacgtagatagtatg
gcctcggttgtatgcaaattgtgcagcctcttggtaatggtcccaggtaatcccgagaaa
ggcgtgatggagatccttaaaagtatcttctctgctacttgctctagttcatgggcaacg
ccgagattaaaggtgaagatattctgtgctataatgtcactgttgtcaacactttctcag
gacaatctgccttaccattctgccaatccagagataattggaaatgatttgttgttcttt
ggtgattcatcatacaagcaggaacttgtctcatgtagtcagttcgttctaagtgagcta
ttagatgctattgagcaagagtcttcacagattgctcgggggaatatggccattgaagct
tgcaattgcatatcattagcactagttatgaatgagaaagtcacagaactttgcttgaga
ctgctggaaacagcaaaaggttgtttgggtgccaacgacaggtacattgaatcgactaag
aaatcactccaactatga

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