Arabidopsis lyrata (lyrate rockcress): 9330335
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Entry
9330335 CDS
T01578
Name
(RefSeq) UPF0505 protein isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9330335
Membrane trafficking [BR:
aly04131
]
Protein recycling
Others
Retriever complex
9330335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
9330335
NCBI-ProteinID:
XP_020868718
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MELEFRRRDYGATHESQFLPRSEALKHPLSSIFASRQQQAKTVRGSDLDFFDPLRGLDVN
ASAEEKVEDTSISIEAVTQDLIKEWKSLKRVLMQRFPVSKVISFSPISNIIMKGSKAVEA
PSALSHSEETGSEQTSLEEPAKIINQQEYIAKVHELREGIKCAWQAEDRVTSLKLSIKVT
KLLMDTTVLQFYPTVFVIVTDMLDMLGDMVWERIKQKAELDVDGTVICSLLNDFQSSDIC
LEARETCYNWFCKVGSVRELLPRIYLELAIMPCWRFLINQPMEVLDRLVMMVRGLADPLA
SLYCRLYMVHRMQKFGFCNSGYLIKCIKDIEDVLAPVLVDKEGYSYITDDKKLLFSLMEP
AIEYIVKCLFLTGRQENNVLSMLEELGFGRNKFQSSCNSSHVSILLHHLLKELPSELVIS
LTTEILDMIKCSNDCSFSQVLNYRLLGNKLSEGKSQEGFLSSLIDEVIQAASQYQSLYDY
LRIMDAYVDLMLQNKMENHLDALLDDIVNLARDKFLCEEEQASLQSIILKLLAHFENLQE
VLPLNHFIEILDLMSGTSKSSVNMHLLNMGTRNGCICDSTTVQFLFEVSQALYDATDFVH
IKDDDNRQTSHLISRFVEMVDYGAEMERHLMFLAECREAFNGIHELKETLVRSSNTLAVK
ALKAGKKHTNFVKSCLAFSEVTIPSISSPTKHLNLYLETAEVALLGGLISHSDGLVMSAV
EYLENVAVTDGLKLIDVDSMASVVCKLCSLLVMVPGNPEKGVMEILKSIFSATCSSSWAT
PRLKVKIFCAIMSLLSTLSQDNLPYHSANPEIIGNDLLFFGDSSYKQELVSCSQFVLSEL
LDAIEQESSQIARGNMAIEACNCISLALVMNEKVTELCLRLLETAKGCLGANDRYIESTK
KSLQL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaattccggcgtcgcgactatggagctacacatgaatctcaatttcttcct
cggtcagaagctctaaagcatcctctttcctctatatttgcttctcgtcaacaacaggct
aaaactgtcagaggtagcgatcttgacttctttgatccgttgcggggattggatgtgaat
gcttctgcagaagagaaggttgaagatacttctatatccattgaagctgtaactcaggat
ctgataaaggagtggaaatcacttaaaagagtcttaatgcagcggtttcctgtctccaaa
gtgatttcattttctccaatatctaatataataatgaaaggttccaaagcagttgaggcc
ccttctgctctttcccattcggaggaaaccggtagcgaacaaacttctctggaagagccg
gccaaaataatcaaccaacaggaatatatagccaaagtgcatgagctaagagagggaatt
aaatgcgcttggcaggctgaagatcgagtaacatcgttgaagttatcaataaaggtcaca
aaacttctgatggatacaacagttttgcagttttatcctacagtctttgtcattgtcact
gacatgctagatatgcttggggatatggtgtgggaacggatcaaacagaaagcagaactt
gatgtagatggaacagtgatctgctccttactgaatgattttcaatcaagtgatatctgc
cttgaagcaagagagacttgctataactggttttgcaaagttggttctgttcgagaactt
ctccctcgcatttatctggagcttgcaatcatgccttgctggcgtttcctcattaatcaa
cccatggaagttcttgatcgtttagtcatgatggtgagaggtctcgcagatccactggca
tctttgtattgtcgcctttatatggtgcatcgcatgcagaagttcggcttctgcaattct
ggatatttaatcaaatgcatcaaggatattgaagatgtattagcacctgttttagtggac
aaggaggggtattcctatattacagacgacaaaaagttgctttttagtttgatggaacca
gccatcgagtatatagtgaaatgcttatttctaactggacgtcaggagaacaatgtcttg
agcatgcttgaggagcttggatttggaaggaacaaatttcagtcatcttgcaactcttcg
catgtgtccattttacttcatcatctactcaaggaacttccatctgaattagttatttca
ctaactacggagatcctggatatgattaaatgcagcaatgattgttcctttagtcaggtt
ttgaattataggttattgggaaataaactgtctgaagggaaatctcaagaaggttttctc
agttcactcattgatgaagttattcaggccgcttctcagtatcagtcactgtatgactac
ttaagaattatggacgcatatgtggatcttatgttgcagaacaagatggaaaatcatctg
gatgctctcttggatgatattgtaaatctagctcgtgacaagtttctttgtgaagaagaa
caagcaagtttgcaatccataattttgaagctgctcgctcatttcgagaacttgcaagaa
gtacttcctctgaatcatttcatcgagattctggatcttatgtctgggacttcaaagagc
agtgtaaacatgcatcttcttaacatgggtacaaggaatggctgcatttgtgattcaaca
acagtgcaatttctttttgaagtttctcaggctctttatgatgctacagatttcgttcac
ataaaggatgatgacaatagacagacatcacatttaatttctcgttttgttgagatggtt
gactatggggcagaaatggaacgccatttgatgtttttggcggagtgtcgtgaggccttt
aatgggatacatgaacttaaggaaacacttgtccgttcaagcaacaccttagcagtaaaa
gcactgaaagcaggaaagaagcataccaactttgtaaaatcttgcctagcatttagcgaa
gtgaccatcccctctatttcatctcccacgaaacacttaaatctttatcttgaaactgca
gaggttgcacttttaggtggtttgatttctcattcagatggactggtcatgtcagctgtt
gagtatctagagaatgtagcggtaacagatggtttaaaattaattgacgtagatagtatg
gcctcggttgtatgcaaattgtgcagcctcttggtaatggtcccaggtaatcccgagaaa
ggcgtgatggagatccttaaaagtatcttctctgctacttgctctagttcatgggcaacg
ccgagattaaaggtgaagatattctgtgctataatgtcactgttgtcaacactttctcag
gacaatctgccttaccattctgccaatccagagataattggaaatgatttgttgttcttt
ggtgattcatcatacaagcaggaacttgtctcatgtagtcagttcgttctaagtgagcta
ttagatgctattgagcaagagtcttcacagattgctcgggggaatatggccattgaagct
tgcaattgcatatcattagcactagttatgaatgagaaagtcacagaactttgcttgaga
ctgctggaaacagcaaaaggttgtttgggtgccaacgacaggtacattgaatcgactaag
aaatcactccaactatga
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