Arabidopsis lyrata (lyrate rockcress): 9330350
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Entry
9330350 CDS
T01578
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9330350
Membrane trafficking [BR:
aly04131
]
Protein recycling
Others
EARP complex
9330350
Endosome - Golgi transport
Tethering complex
GARP complex
9330350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
Motif
Other DBs
NCBI-GeneID:
9330350
NCBI-ProteinID:
XP_020866203
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MAVSAVEQLQVMTSKRQYKEAATQLECLHNHLGYASFCLGTGTKTEEIFLLKNLSDSCLV
IDAPGPSVREELINNFCSRELTSYEQIYVGAELKTLDEXERIYNRLNCLIRTNQEKWTIF
PASWHVPYRLCIQLCNKTRVQVESILVNLKEKPDVEKLLLELKRTLEFEMELEMKFVGGG
SFGDDTKEIGGGGNNSQKVPLLTSYLSWQFNFRGMISSCFEPHLTXYIEKEEMELMQLLE
KVVQEEIWDIEEESQTNILSSSILLFFTIKKSLKRCSALTKNQTLFNLFKVFQRVLKAYA
TKLCFKLPKGGTSIIAAATGMEGRIKVSDKDERMICYIVNTAEYCHKTSGDLAEEVSTII
DPPYADGVDISEVQDEFSSVITRALVTLVHGLETKFDKEMVAMTRISWGTLKSVGDHSIK
YVDGINTILCSSILVLGNLLTTVYFXFFLDKLALSLGPRFYANIFRCKQISETGAHQMLL
DAHDMKMIVLKVPSLARQTPTASYVEFVNHQMKRAEAVLKVITSPIVSVVDTYCALFPEG
TPMEFQRILELKGLTKAEQKSILDDFNNPGCSGNARSTCTATGSR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctctgcggttgaacagcttcaggtgatgacatcaaaaaggcaatacaaggag
gcagctacacagctggagtgcttgcataatcatttaggctatgcttctttctgcttaggt
actgggacaaagacagaggaaatttttttgctaaagaatttatctgattcttgcttggtt
attgatgctccggggccatctgtgagggaagagttgataaacaacttttgcagcagggag
ctaacctcatatgaacaaatttatgtaggagctgaattgaaaacgttggatgaantagag
cggatatacaatcggttaaattgtctaattcgaacaaatcaagaaaaatggacgattttt
cctgcttcatggcatgtgccttatagactatgcatccagttgtgcaacaaaacaagggtg
caagtagaatctattctagtcaacctgaaagagaagccagatgtagaaaaattgcttctg
gaactgaaaaggacgctagagtttgaaatggaacttgaaatgaaatttgttggtggtggg
agtttcggagatgacactaaggaaattggtggagggggaaataatagtcagaaagtgcca
ttgctcactagttacttgtcctggcagtttaacttccgtggaatgatctcttcttgcttc
gagccccatttaacctaatatattgagaaggaagagatggaacttatgcaactcctggag
aaagttgttcaggaggaaatatgggatattgaagaggaaagtcaaactaatattctatct
agcagcatactgttgtttttcactataaaaaagagcttgaaacgttgtagtgctctcacc
aagaaccagactttattcaatttgttcaaggtctttcaacgagttctgaaagcctatgca
acaaagctatgttttaagctcccaaaaggaggcaccagtatcattgccgcagccacaggc
atggagggtcggataaaggtctcggacaaagatgaaaggatgatatgttacatagttaat
actgcagagtattgtcacaaaacatctggtgatctggcagaagaagtctcaacaattatt
gacccgccttatgctgacggtgtagacatatcagaggtccaggatgaattttcatccgtc
ataacgagagcattggtgacactagttcacggactggaaactaaatttgacaaagaaatg
gtagccatgacgcgcatctcatggggcacacttaagagtgtgggtgaccattctattaag
tacgtcgatggaataaatacaatcctttgcagcagcattcttgtccttggaaaccttcta
acaacggtttactttncatttttcctcgacaagctggcattatcccttggaccaaggttc
tatgctaatattttcagatgcaagcaaatatcagaaactggagctcaccagatgttgcta
gatgcgcacgatatgaagatgatagttttaaaagttccatctcttgccagacagactcca
actgcgagctatgtcgaatttgtgaaccatcaaatgaaaagagctgaagcagtcctaaag
gtcataacatccccaatcgtctcagtggtagacacttattgtgcactgtttccagaagga
acaccaatggagtttcaacgcatcttggaacttaagggtcttacgaaagctgagcagaag
agtatacttgatgatttcaacaatcctggttgcagcggcaatgccagaagcacctgcacc
gccactggcagtcgctaa
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