Arabidopsis lyrata (lyrate rockcress): 9330569
Help
Entry
9330569 CDS
T01578
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aly04131
]
9330569
04121 Ubiquitin system [BR:
aly04121
]
9330569
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
9330569
Membrane trafficking [BR:
aly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
9330569
Ubiquitin system [BR:
aly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
9330569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Ribosomal_60s
RING_XB3-XBAT31
zf-RING_6
HypA
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
9330569
NCBI-ProteinID:
XP_002894508
UniProt:
D7KMA3
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MEEAIATRYWCHMCSQTVDPVMEAEIKCPFCQSGFVEEMEDDDHDSSDPADVRANNSLWA
PILMELMTDPVRRRRNQSVESVEDNQNEAQTESNENNGEENDLDWQLQEILRRRRRHSAA
VLQLLQGIRAGLSVESESTGNGDNNPGRVILINTSNQTITVQSSADMDSLPAGSLGDYFI
GPGFEMLLQRLAENDPNRYGTPPAKKEAVEALGTVKIEDTLQCSVCLDDFEIGTEAKLMP
CEHKFHGDCLLPWLEIHSSCPVCRYQLPADEPKTDSVTTTSDNNGGSGAPATSSHGAENS
RRQEEEEEEDAEEENEDNDGSGFSIPWPFSTLFTSSQDSNAPTDSS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagcaattgcaacgaggtattggtgtcacatgtgctctcaaactgtggatcca
gtcatggaagctgagatcaaatgccccttttgtcaaagtgggtttgttgaagagatggaa
gacgacgatcatgattcttctgatccggctgacgttagagcaaacaactctctttgggct
cctatcttgatggaacttatgaccgatcctgtgcgccgtaggagaaaccagagtgttgag
tctgttgaagataatcaaaacgaggcacagaccgagagtaatgaaaacaacggtgaagaa
aatgatttggattggcagcttcaagagattctcaggagaaggagaagacattctgctgct
gttttgcagttgcttcaggggatacgagcaggcttgtctgtagaatctgagagtactggt
aatggagataataatccgggacgggtcatcttgatcaatacctccaatcagactatcacg
gttcaaagctctgctgatatggattctctacctgctggttctttaggtgactatttcatt
ggccctggatttgaaatgttgcttcagcgtctagctgagaatgatcccaacagatatggg
acacctccagctaaaaaagaagctgttgaggctttgggtactgtgaaaattgaagatact
ctccagtgttcggtttgcttagatgattttgagattggaactgaggcaaagctgatgccc
tgtgagcacaagtttcatggtgactgcctgttaccatggcttgagattcacagttcatgc
ccggtttgcagatatcagttacctgcagatgaacccaagactgattcagttacaacaaca
agtgataacaatggaggcagtggtgctcctgctacaagcagccatggagctgagaacagc
aggcgccaagaagaagaagaagaggaagacgcggaggaggagaacgaggacaatgatgga
agcggattctcgatcccatggccgtttagcactttgtttacctcgtcccaagatagcaat
gcaccaacggattcgagttaa
DBGET
integrated database retrieval system
