Arabidopsis lyrata (lyrate rockcress): 9330571
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Entry
9330571 CDS
T01578
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
9330571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
9330571
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
9330571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
9330571
NCBI-ProteinID:
XP_002894510
UniProt:
D7KMA5
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MSKVEIEEDMEGDRISTNDYYFEKIGEPISIKEDDAQYDIENPPSQPLAISERHGVVFVA
HSSGFFVGRTKDVISASKNSNGNGDKVYIQDLSLVDVPVGDVRILSLSADDSILAVTVAA
DIHFFSVDSLLKKDAKPSFSYSPDESGFVKDFRWIRKDKHSYLVLSNTGKLFHGIDNAPP
RHVMDAVDAVEWSSKGSYIAVAQDNSLRILSSKFNEKRCIALSFDDWIGDSDEDCSVKVD
SIRWVRNNCILLGCFQLIDGREENYLVQVIRSPDGKISDGSSNLVALSFSDLFPCSMDDI
VPVGVGPHLLFSYIDQCKLAVTANRKSIDEHIVLLDWSPGDNKTAVSVVDIDRETFLPRI
GLQENGDDNTIMGLCIDRVSVAGTVNVRSGSDELKELPPYFVLVCLTLEGKLVMFNVASV
AGPPASSDADLASSSDIEDAYTPLIEDDLSKQSSEEPEEHQQLNVSVQNEQKHLNAEKFS
TEQSFPNENIFSKEFESVKSSVSEDNKKKQEPYAEKPLQVEDGQQSMIPRQFGTSFGQSP
VSLGYDTNKFSGFGPALSVSDKLQKDVSAQSKSMHLQANVESKSTPALFGSPGLQNSIFQ
SPLNTSSQPWSSGKGVSPPDFVPGPFPSVKDTQHKQSVQSGTGYVNPPMSTKETPVQVVE
TGRASALSNLSSPLGQNWDTNEGVEKIEPIPSIRASQLSQQVKSSFEKSASHQQHKTPLS
AGPLRLEHNMSKQPSNINEMAREMDTLLQSIEGPGGFKDSCEVLLKSHVEELEQGLESLA
GRCQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPELE
AKRQHIMKLNKDLTHQLIELERYFNRLELDRYHEDGGHPVARRGVPSRSAPSRRVQSLHS
LHNTMSSQLAASEQLSECLSKQMTYLKIDSPVKKNVKQELFETIGIPYDASFSSPDAVKA
KNASSAKNLLLSSIPASINAQSRQRQSSAMKNSDPETARRRRESLDRNWAAFEPPKTTVK
RMLLQEQQKTGMNQQIVLSERLRSVNNTQERSLLRLKNHASPVVSSNKGIMESFQQDTSE
AQSTLFKTRPPMPQSNSPFTISPISASKPSFNWSGNKSSSTTSYAEESAPSQNKDTRTVS
QPGGSNFLLKRPVASTVFEQTEKKAGEFKFSEAKANAFVETAAGSVQHLSTTSSGSDYEF
SKGFGAQLSPMSSGGPASSFPSKSLFGFKTSSSIYGDKVTFPAATVSVSSSPLSSTPLDS
TSTLSTPSSPPMSSSTQDSVPASIPISSAPVMQTFSVASTSTVSATGFNVPFGKPLTSAN
VDLSQAAPSTPSPSPGPTTGFSFNLPALSPSSPEMVSSSTGQSSLFPLSSPASQVSSDQA
SATSSLTDSSRLFSSNSLSSTPITSTPPDAFQSSQAFTPSSAVPITEPVSEPKKPEVQSS
SILSTQSTVDSVANATKTQNEPRPVKSEISNLETTVTPVSSSGFLSGFSSGTESSLASMA
APSFSWPGSSQPQQQSSTPVPFPASLPTSASPFGEKKDTVDTQEDEMDEEAPEASQATEL
SMGSFGGFGLGSTPNPAAPKSNPFGGPFGNATTTTTSNPFNMTVPSGELFKPASFNFQNP
QPSQPAGFGAFSVTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPGATFG
SPTGFGGSNPGSGLPNAPTSGGFAAAGSSATGGFAAMASAGRGFAGASSTPTGGFAALAS
GSGGFAGAAPGGGGGGFGGLGSGTGGFGGFAPQGSGGFAGAGGGGGFGGFGGQAQGQAGG
GGFSAFGGNSGATGKPSELFTQMRK
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagttgagattgaagaagatatggaaggagatcgcatctcaacgaacgattac
tacttcgagaagatcggcgaacctatcagtatcaaagaggatgacgctcaatacgatatc
gaaaaccctccgtcacagcctctcgctatctccgaacgtcacggcgtcgtcttcgtcgcc
cattcctccgggttttttgttgggaggactaaggatgtaatttctgcatcgaagaacagt
aacgggaacggtgataaggtttatatccaggatttgagcctcgttgatgttcctgttggg
gacgttcgtatattgtctctctcggcggatgattcgattctggctgtcaccgttgctgcc
gatattcatttcttctctgtggattcacttcttaagaaggatgcaaaaccttctttttct
tattcacctgatgagtcaggctttgttaaggattttcggtggataaggaaagataagcat
tcttatcttgttctttcgaatactgggaagctctttcatggaattgacaatgcaccccct
agacatgttatggatgctgttgacgccgttgaatggagttcaaaagggagttatatcgct
gtggcccaagataacagcctgcggattttatcgtcaaaatttaacgagaagcggtgcata
gcactatcatttgacgactggattggtgattctgatgaagactgttcagtgaaagttgat
tctatcagatgggtacgcaacaactgtatccttctcggatgctttcagctgattgatggc
agggaagaaaattaccttgttcaggttattaggagtccagatgggaagatttctgatggt
tcatccaatctggttgctttatccttctccgatttgtttccatgttctatggatgatatt
gttccagttggtgttggacctcatttgctctttagctacatagaccaatgcaaactggcg
gtcacagcaaacagaaagagcatagatgagcatattgttttgctggattggtcacctggt
gataataaaactgcagtttccgttgttgatattgaccgagagacctttttgccaaggatt
gggctccaagaaaatggcgatgacaatacgatcatgggactctgtatcgatagggtttct
gttgcagggactgttaatgtccgttccggaagtgatgaacttaaagaactcccgccatat
tttgttcttgtgtgcctcactttggaaggaaagctggtcatgtttaatgtcgctagtgtt
gcaggacccccagcttcatctgatgctgatttggcctcttcttctgatatagaagatgct
tatacccctttgattgaagatgacctttctaaacaatcttctgaagagcctgaagaacat
cagcagttgaatgtttcagtacaaaatgaacagaagcacctcaacgcagagaagttctct
actgaacaaagtttcccaaatgaaaacatttttagtaaggaatttgagtctgtaaaaagt
tcagtgtctgaagacaacaagaagaagcaagaaccatatgctgaaaaaccgttacaagta
gaagatggtcaacaaagcatgattcctaggcagttcggaacaagttttgggcaatcacct
gtgtccttaggatatgacaccaacaaattttcaggtttcggtcctgccctctctgtttcc
gataagcttcagaaagatgtatctgcgcagtccaagtctatgcatttgcaggccaatgtt
gagtcaaagagtacaccagctttatttggatctcctggcctgcagaactcaatttttcag
tcaccactaaatacgtcatctcagccatggtcaagtgggaaaggcgtctcacctccagat
tttgtacctggtccctttccttctgtgaaagatactcagcataagcaatctgtacagtct
ggaactggttatgtgaatcctcctatgagcactaaagaaacacctgttcaagttgttgag
actggtagagcatcagctctgagcaatttaagttctccgctaggccaaaattgggacact
aatgaaggggtggagaaaattgagccaataccttctatccgtgcctctcaattgtcacaa
caggtgaaatcttccttcgaaaaatcggctagtcatcagcagcacaaaactccgctcagt
gctggacctctgagacttgagcataacatgtcaaagcaacccagtaatataaatgagatg
gccagagaaatggatacacttttacagtccattgaaggaccgggtggtttcaaggattct
tgcgaagttttactgaaaagccatgttgaagaactggagcaaggacttgaaagtcttgct
ggcaggtgccaaacgtggaagagcacaattcacgagcagcaagcagagatccaacatctt
cttgacaaaacaattcaagttttggcaaaaaagacatacatggaaggtatgtataagcaa
actgctgataaccagtactggcaactttggaaccgccagaagttgaatcctgagcttgag
gccaagcggcagcatattatgaaactaaacaaggatttgactcatcaactgattgaacta
gagagatattttaatcggcttgaactcgatcgctaccatgaggatggtggacatcctgtg
gcacgaagaggcgtgccaagtaggtctgctccttcaagacgtgtgcaatcccttcacagc
cttcataacacaatgagttcccaattggcagcttctgagcaactctctgagtgtctctca
aaacaaatgacatatttgaaaatcgattcacctgtaaaaaagaatgtgaagcaggagttg
tttgagacaattgggatcccttacgatgcttctttcagctcaccagatgcggtaaaagct
aaaaatgcatcttcagcaaaaaacctattactgtcttctattcccgcaagtataaatgca
cagtcaagacaacgtcagtcatctgctatgaaaaattctgaccctgaaactgccaggagg
agaagagaatcactagacaggaattgggctgcttttgagcctccaaaaacaactgtcaaa
aggatgcttctgcaggagcaacagaagacgggtatgaaccaacagattgtcttaagtgag
agactacggtctgtgaataatacacaagagcgatcactgcttcgcctgaaaaatcatgca
tcacctgtagtctcctcaaataagggcattatggaatcattccaacaagacacatctgaa
gctcaatcaaccctattcaaaacgaggccacctatgccccaatctaacagtccctttacc
atctctccaatctctgcctcaaaaccaagtttcaattggtctggaaataagtctagcagt
acaacttcttatgctgaggagtctgccccgtcgcagaataaggatacaaggacagtttca
caaccaggaggatcaaattttcttctgaaacgaccagtggcctcgactgtatttgaacag
acagaaaagaaggctggagaattcaaattttctgaagctaaggccaatgcttttgttgaa
acagctgctggaagtgtgcagcatctttctaccacatcatcaggatctgattatgaattt
agcaaaggttttggcgctcaactttcacccatgtcttctggtggaccagcatctagtttc
ccttccaaatcgttgtttggtttcaaaaccagtagcagtatctatggtgataaagttact
tttcctgctgcaacggtatcagtttcttcttcacctttgtctagcacgccacttgattcc
acttccactttatctacaccatcatcacctccaatgtcatcctctacacaagattcagtt
ccagcatctattcccattagctcagcaccagtcatgcaaacgttttcagtcgcatctaca
tctacagtttctgctacggggttcaatgttccatttggtaaaccgttgaccagtgccaat
gtagatctcagtcaagcagctccgtcaacaccttctccatcacctggtcccacaactggt
ttctcttttaatttaccagctttatctccatcatcccctgaaatggtctcatcctcaaca
ggccaatcttcattatttccactatcttctccagcgtcgcaagtgtcatctgatcaggcc
tctgcaaccagttccctaacagatagtagtcgtttgttctcatcaaattccttatcttcg
actcctattacttcaacccctcctgatgcgtttcagtcttctcaagctttcaccccgtcc
tctgctgtgcccattacagagccagtctcggaacctaaaaaaccagaggttcaaagttca
tcaattctgagtacgcaaagtactgtagattctgtagcaaatgctacaaaaacacagaat
gagccacggccggtgaaaagtgaaatttcaaacctggagactacagtaacccctgtcagt
tcatctgggttcctgtctggattttcatcaggaacagagtctagtcttgcaagcatggcg
gctccttcattcagctggccaggtagttctcagccacaacagcaatcgtctacacctgtc
cctttccctgcatccttaccaacttcggcgagtccatttggtgagaaaaaagatactgta
gatacacaggaagatgaaatggacgaagaagctccagaggctagccaggcaactgaactt
agtatgggaagttttggaggtttcgggcttgggtcaactccaaacccggctgcccccaaa
tctaatccatttggtggtcccttcggtaatgctacaacaacaacaacaagtaatccattc
aatatgacagtcccgagtggcgagctattcaaacctgcatcgttcaactttcaaaatcct
caaccatctcaaccggcaggttttggtgcgttctctgtaacaccttcgcagacacctgct
cagagtggatttggccaaccgtcacagattggtgggggacagcaagctctagggtcggtt
cttggctcctttgggcagtcgagacagattggtgctggtctcccaggggctacgtttggt
tctcctacaggatttggtggctctaacccaggaagtggtctgccaaatgcaccaacatcc
ggtggttttgctgctgctggttctagtgccactggtggctttgccgccatggcttcagca
ggtcgaggctttgctggtgcttcttctactcccactggtggctttgctgccttggcctca
ggtagtggaggctttgctggtgctgctccaggaggaggaggcggtggatttggtggactt
ggttcaggcaccggaggtttcggaggctttgctcctcagggtagtggaggtttcgccgga
gcaggaggaggtggtggttttggtggtttcggcggccaagcgcaaggccaagcaggtggt
ggtggattctcagcctttggcggcaactccggagcaacaggaaagccatcggaactcttc
acacagatgagaaaatga
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integrated database retrieval system
