Arabidopsis lyrata (lyrate rockcress): 9330692
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Entry
9330692 CDS
T01578
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 12
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
9330692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aly04040
]
9330692
Ion channels [BR:
aly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
9330692
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Paralog
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Motif
Pfam:
cNMP_binding
Ion_trans
PPDK_N
Motif
Other DBs
NCBI-GeneID:
9330692
NCBI-ProteinID:
XP_020866254
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MQRSSTFQYVKGKGNFKNLRVRLKKEYRNMKTFENWRKTIMLLCFAAFAIDPLFLFIPVI
DSHRFCFTYDKKLGLAACVIRTFMDSFYVIHIIFRSITELIAPRSQVSLRGEIIMHSKAT
RKKRLIFRFMVDIASILPIPHVVVLTFFIRKQKSALLVSKDILKKVIICQYIPRILCIYL
LFQEVTKASGTVVETKWIGAALNLFLYMLPSYVFGGFWYFNAIQRENLCWHDVCARTPGC
NVMNLYCARGSEDNNRFLNNSCPLIDPGQITNSTVFNFGMYIDALKSGVVESRYFPRKFF
YCFWWGLRNLSALGQNLETSNSVEEIVFVIIICILGLLLFALLIGNVQKYLQSTTIKVDE
MEERKRDIEKWMSYRNLPDDLKQRIRKYGEYTWKQTRGIKEEALLRSLPIDLRLETKRHL
YLNLLKGVPLFEGIDDGWLLSAMCNRVKYVFYSADSYIVKEGDPMEEMLIITKGKLKSTT
RSHEIGEELKAGDICGELLFNSSSLPTSTRTIITLTEVEGFTLSPDDVKFVASHFNHLQS
VIHKQMSRIYIFFRSSAACVIQATWKEYVRRKLSNNLRAERENQQITQDTDQHD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagagatcttcaacctttcaatatgtaaagggaaaggggaatttcaagaatttgaga
gtgcgcttaaagaaggagtatagaaacatgaaaacctttgaaaactggaggaagacaatt
atgttactttgctttgctgctttcgctattgatcctttgtttctctttatccctgtgatt
gattctcatagattctgctttacttatgacaagaagctagggctagcagcttgtgtcatt
cgtacttttatggactcattctatgtaattcacatcattttccgttcaataaccgagctc
attgctcctcgttcacaagtatctttaagaggcgagataattatgcattccaaggctaca
aggaaaaagcgcctcatctttcgcttcatggttgacattgcttcaattctccccattcct
catgtggtggttctcactttctttatacggaagcaaaagtctgccttgctggtgtcaaag
gacatattaaaaaaggttataatatgtcaatatataccaagaatcctctgtatctatctg
cttttccaagaagtgacaaaggcctctggtacggtagtagaaacaaagtggattggagct
gctttaaaccttttcctctacatgcttccgagttatgtgtttgggggtttctggtacttc
aatgcaatacaaagggagaacttatgctggcatgatgtgtgtgctagaacacctggatgc
aatgtcatgaatctatattgtgcacgaggtagcgaagacaacaatcgttttctgaacaat
tcatgcccattaattgaccctggccaaatcacaaactccacagtcttcaattttggtatg
tatattgatgcattgaagtcaggggtggtagagtccaggtattttccaaggaagttcttc
tactgcttttggtggggtcttcgaaatcttagtgctttgggtcaaaacctggagacaagc
aactctgtagaggagatcgtgtttgtcataatcatctgtatacttggtttactcttgttt
gctttactcattggaaacgttcagaagtacttgcaatcgactacgatcaaagtagatgaa
atggaggagagaaaaagagacatagaaaagtggatgtcttatcggaacctacccgacgat
ctcaagcaacgcattaggaaatacggggaatacacatggaaacaaactagaggcatcaaa
gaggaagctcttcttcgtagccttcctatagacctcagactcgaaaccaaacgacatctt
tacctgaatctattaaagggtgttcctttgtttgagggcatagatgatggttggttacta
tcagcaatgtgcaaccgggtgaagtatgtgttctactcggcagatagctacatagtaaaa
gagggtgacccaatggaggaaatgctgattataacaaaaggaaaactaaaaagtacaact
aggtctcatgaaataggtgaagaactaaaagcaggtgacatatgtggagaacttctcttt
aatagttcttcccttcccacctcaaccagaactataataactcttaccgaagttgaaggt
ttcactctctcgcctgatgatgtcaagtttgtagcttctcattttaatcaccttcaaagc
gtgatacacaaacaaatgagcagaatatatatatttttcagatcatcagcagcatgcgtc
atacaggcaacatggaaggaatatgtgagaaggaagctttctaacaacttacgcgccgaa
agagagaatcagcaaattacacaagacactgatcaacatgactaa
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