Alteromonas sp. Mac2: AV940_01055
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Entry
AV940_01055 CDS
T05899
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
alz
Alteromonas sp. Mac2
Pathway
alz03420
Nucleotide excision repair
alz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AV940_01055 (uvrD)
03430 Mismatch repair
AV940_01055 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_01055 (uvrD)
Enzymes [BR:
alz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AV940_01055 (uvrD)
DNA repair and recombination proteins [BR:
alz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV940_01055 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AV940_01055 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AMJ89175
LinkDB
All DBs
Position
complement(256459..258630)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALILAGAGSGKTRVLVHRIAWLMEVENIAPFSILAV
TFTNKAAKEMRGRIESLMGRGLNSMWIGTFHGLAHRLLRAHHAEANLPENFQILDSDDQY
RLIKRILKAMNLDEKHWVPRQIQWYINGNKDEGLRPQHIETHNDQTQQKMREIYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPEVLANYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGN
QNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFNNPTTIRLEQNYRSTGTILKAANTVIDN
NTGRLGKELWTDGNDGEPISVYAGFNELDEARFIVSKIKDWLNQGNALKDTAILYRNNAQ
SRVLEEALLHQGTPYRIYGGLRFFERQEIKDALGYLRMMNHPHDDAAFERVVNTPTRGMG
EKTLSQVREAARAHNCSMWQASQLLINENALKGRALNALQSFVLLVTELEQATVDEPLEK
HADVAIRQSGLYAMYQAERGEKAQARLENLEELVTACKQFTVPDEAEEMTPLSAFLAHAS
LEAGETQAGTDQDAVQMMTIHTAKGLEFPMVFMAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMEKLYITYAESRRLYGQDKYHTASRFIREIPADCVEEVRLKSTISRPIHNRFS
QATSHASFEETGFQLGQKVAHRKFGEGIVLNYEGSGEHARVQVNFDEFGTKWLVLAYAKL
EKA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatcccgactgcttgacgagcttaacgacaaacaacgtgaagcggtagcagcc
cctctttctaacgccctcattttagctggcgcaggaagcggtaaaactcgggtgttagta
catcgaatagcatggttaatggaagtggaaaatattgcccccttttccattctggccgta
acctttacgaacaaggccgccaaagaaatgcgtggccgaatagaatcgttgatgggccgt
ggtcttaatagcatgtggattggtactttccacggattagcccacaggctgcttcgcgcc
caccatgcagaagctaatttgcctgaaaacttccaaattcttgattcagatgaccaatac
cgtttgattaaacgtattctaaaagccatgaatttagacgaaaagcactgggtgccccgt
caaattcagtggtacatcaacggtaataaagacgaagggctacgtcctcaacatattgaa
acccacaacgatcaaacccaacaaaaaatgcgtgaaatttacgccgcgtatcaagacgcg
tgcgaccgctcagggcttgtggattttgccgagttgttgttacgtgctcacgaactttgg
gctaaaaaccccgaagtactcgccaactaccagcgccgcttccgcgctgtattagtggac
gaattccaagataccaacaacattcaatacgcgtggctacgcatgttatgtagcggcaat
caaaacaatattatgattgtgggtgatgacgaccaatctatttacggctggcgtggcgcg
aatgttgataatattcagcacttcttaaaagacttcaataaccccacaaccattcgatta
gaacaaaactaccgttctaccggcaccatcttgaaagccgccaatacggttattgataac
aacacaggccgattaggcaaagagctttggacagacggcaacgatggcgagcccatatct
gtttatgctgggtttaatgagttagacgaagcccgctttattgtgtcgaaaattaaagac
tggctgaaccaaggcaatgcactaaaagacaccgcgattttgtatcgcaataacgcccag
tcgcgggtattagaagaggccttacttcaccaaggtacaccctaccgcatttatggtggc
cttcgattcttcgaacgccaagaaattaaagatgcacttggctaccttcgtatgatgaat
caccctcatgatgatgccgcctttgaacgtgtggtgaatacacctactcgcggtatgggt
gagaaaaccctctcacaagtacgagaagccgccagagcacataattgctctatgtggcag
gctagccaacttctcattaacgaaaacgcgctaaaaggccgtgcacttaacgcccttcaa
agtttcgtgctgttagttaccgagcttgaacaagctacggtagacgagccattagaaaaa
cacgccgatgtggctattaggcagtcaggcttatacgccatgtatcaagccgaacgcggc
gaaaaggctcaagcgcgcttagaaaacttggaagaattggttaccgcttgtaagcaattt
acggtacctgacgaagcagaggaaatgacgccgctttcagccttccttgctcacgcctcg
ttagaagcgggtgaaacccaagcaggtaccgaccaagatgcagtgcagatgatgacgatt
cacaccgcaaaagggctagaattcccgatggtgtttatggccggtgttgaggaaggcatg
tttccaagccaaatgaccaatgatgaacctggcagaatggaagaagaacgccgcctgtgt
tacgtgggcatgacccgcgccatggaaaagctgtatattacttacgcggaaagccgccgt
ttgtacgggcaagacaagtatcacacggcatctcgctttattcgtgaaattcctgctgac
tgtgttgaagaagtaaggctcaagtctactatttctcgaccgatacataaccgattcagc
caagcaacatcacatgcctcttttgaagagaccggctttcagttgggccaaaaagtggct
catcgcaagttcggtgaaggaatagtattaaactacgaaggcagtggtgaacacgctagg
gtacaagttaattttgacgaattcggtacaaaatggctcgttctcgcctatgctaaattg
gaaaaagcatag
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