Alteromonas sp. Mac2: AV940_03070
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Entry
AV940_03070 CDS
T05899
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alz03009
]
AV940_03070
03016 Transfer RNA biogenesis [BR:
alz03016
]
AV940_03070
Enzymes [BR:
alz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
AV940_03070
5.4.99.29 23S rRNA pseudouridine746 synthase
AV940_03070
Ribosome biogenesis [BR:
alz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AV940_03070
Transfer RNA biogenesis [BR:
alz03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
AV940_03070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMJ89542
LinkDB
All DBs
Position
complement(731256..732035)
Genome browser
AA seq
259 aa
AA seq
DB search
MANPAFVYNPPVQPYLTILYQDDDILVANKPSGLLSVPGKAEEHKDSLISRVNTVFPTAT
VVHRLDMATSGIMVMALNKESHRHISKQFELRQTKKRYFARVFGNVKNSEGEVNLPLICD
WPNRPKQMVDYARGKKALTHYEVVDVIPKVSPQPVNSAASSYTSPSTSTTSELSETLVAL
YPVTGRSHQLRVHMLELGHPILGDRLYAHAEALSMAERLQLHAESLSFAHPASEDWLTFQ
TPIPFTAYAHYSPAPLSID
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctaatccagcgtttgtttataacccgcccgtacagccctatttaaccattctctac
caagatgatgacatcttggtagcgaataagcccagcggcctgttaagtgtgccaggtaaa
gcagaagaacataaagactcgctcattagcagagttaatactgtgtttcctacggcgacg
gtagtccataggctcgatatggcaacgtcgggtattatggtgatggcgcttaacaaagaa
agccatcgacatatttcaaagcaatttgaattacgtcaaaccaagaaacgttatttcgct
cgggttttcggtaacgtgaaaaacagtgagggagaagtaaatttacccctaatttgtgat
tggcctaatcgccctaagcaaatggtggattatgcgcgaggcaaaaaagctctcacccat
tatgaagtggtagacgttataccaaaagtatcacctcaacccgttaattcagccgctagc
tcttatactagccccagcactagcactacgagtgagctaagcgaaacgttagtggccttg
taccccgttactgggcgctcccaccaactacgtgttcacatgcttgagttaggtcaccct
atcttaggtgataggttgtatgctcatgctgaagcgctgagtatggccgaacgtttgcag
ttgcatgcagaaagcttgagctttgcgcatcctgcctcggaagactggttaacctttcaa
acgcctatcccgtttactgcttatgcccattactcccccgccccactatctatagattga
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