Alteromonas sp. Mac2: AV940_04360
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Entry
AV940_04360 CDS
T05899
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_04360
DNA repair and recombination proteins [BR:
alz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AV940_04360
Archaeal homologous recombinant proteins
AV940_04360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF4901
Motif
Other DBs
NCBI-ProteinID:
AMJ89767
UniProt:
A0AAC8XR25
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Position
1067054..1068343
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AA seq
429 aa
AA seq
DB search
MKVLHTSDWHLGQSFFTKSRKNEHEQFFKWLLGVVEQENIDAVVVAGDIFDTGTPPSYAR
ELYHQLVGDFQGVGCTLVVLGGNHDSVSVLNESRELLSYLNCHVIASTYGNTEAQVLPLR
TRGGEIGAILCAVPFIRARDVLKSEAGESAIEKRQALGEAIKQHYANLYQIALDKRSVLN
VDVPIIATGHLTALGVSQSESVRDIYIGTLEGFSAEGFPPADYIALGHIHRPQKVAGCDH
IRYSGSPIPLSFDELKSQKQVLIATFDNKTLVEVESKPIPRFQAMAVLRGNLEDIELALQ
QNEAVKSASAEHPAWLCIEVETQDYLTDLQQRIQALIDDKPAEILQLKRMRKQRASAISA
EENVNLSELSVREVFDARLSLEAFESDEDKQRKQRIQILFEQVVDDVQLSHEGSEDAVDA
NAQANEGNL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctccacacctcagattggcatttaggtcaaagtttcttcaccaaaagccgt
aaaaatgaacacgagcaattttttaaatggctacttggggtggttgagcaagaaaacata
gatgccgttgttgtggccggcgatatttttgataccggcacaccgccaagttatgcgcgg
gaactttatcatcaacttgtaggtgactttcagggggtgggatgcaccttggtggtgtta
ggcggcaatcatgactcggtgtcggtattaaacgaaagcagggaattgttgtcttaccta
aactgccacgttattgctagtacctatggcaataccgaagcgcaagttttacccttgcgc
acccgaggtggtgaaataggcgcaatattgtgcgctgtaccttttattcgtgctagggat
gttttaaaaagcgaggctggggaatcagcgattgaaaaacgtcaggcgctgggcgaggcc
attaaacagcactatgccaatctttatcaaattgcattagataaacgcagcgtgttgaac
gtcgatgtgcccattattgctaccggacacttaacggcccttggggtaagtcaaagtgaa
agtgtgcgcgacatttatataggaacgctagaaggtttttcagctgaggggtttcctccg
gcagattatatcgcacttgggcacattcaccgcccacaaaaagtggcaggctgcgaccat
attcgatattccggttcgcctattccgttaagcttcgatgaactgaaatcacaaaaacag
gtactaatagccacattcgacaacaaaacgttagtcgaagtagaaagtaagcctattcct
cgttttcaagcgatggcagtgttgcgaggtaatttagaagacattgagcttgccttacag
caaaacgaggcggtaaaaagcgcaagcgctgaacacccagcttggctgtgtattgaagta
gaaactcaagattacttaaccgacctgcaacagcgcatacaagcactaatagacgacaag
cctgccgaaattttgcaattaaagcgaatgcgaaagcaaagagccagcgctatttcagca
gaagaaaacgtcaacttaagtgagttgtctgtacgtgaggtttttgatgcaagactatcg
ttggaagcctttgagtctgacgaagataaacaacgcaaacagcgaattcaaatcctgttc
gaacaggtagtagacgatgtgcagttatcccacgagggcagcgaagatgcagtcgatgcc
aatgcacaggcgaatgaggggaacctatga
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