Alteromonas sp. Mac2: AV940_05055
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Entry
AV940_05055 CDS
T05899
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alz03000
]
AV940_05055
Transcription factors [BR:
alz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AV940_05055
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AMJ89888
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Position
1239838..1240725
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AA seq
295 aa
AA seq
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MNISYRNLQAFIHVAQSSTFAEAAIKLHLTQPALSSAIKKMEEQLGGKLFSRSTRHVALT
KEGEALLPNAIRIMRDWDDTFGDIQNLFAMAKGRLTIAAMPSFAESHLPHLLKRYHQLAP
NINLRILDVVMENVIYEVSEGRAEMGFTFEPQQNEGLIFTPLFEDCFVVVVNPQHELAKA
KTVSWEACIEHPMVMMNRGSAVRMWTQQKISTVGDAVIVAETGQLGTLGQLIKQGLGIAI
MPSLCISSMESIGLTVLNMKDDPLVKRVGMVKNAKRDMSVAGQALWTDVLHHYQR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttcatacagaaatttgcaagcttttattcacgtagcgcaatcaagcacgttt
gctgaggcggctattaagcttcaccttacccagccggcactttcatctgcaataaagaaa
atggaagaacagcttggcgggaaattgtttagtcgtagcaccaggcatgtggcgttaacc
aaagaaggtgaagccttattgcccaatgccattagaataatgcgggactgggacgacact
tttggtgatattcagaaccttttcgccatggcaaaagggcggctaaccattgcggctatg
ccttcctttgcagaatcacatttaccgcatttacttaaacggtatcaccaacttgcgcct
aatattaatctgcgaattttagatgtggtgatggagaacgtgatttatgaagtatcagag
ggcagagccgagatgggcttcaccttcgaaccgcagcaaaatgaggggcttatatttaca
cctcttttcgaggattgttttgtagtggtggtaaacccgcagcatgaattagcaaaagcg
aaaacggttagctgggaagcatgtatcgagcaccctatggtaatgatgaatagaggctct
gcagtaagaatgtggactcaacagaaaataagtactgtgggtgatgcggtgattgttgcc
gaaacgggccagttaggtacccttggtcagctgattaagcaggggttaggcattgctatt
atgccatcgttgtgtatttcatcaatggaaagcattggcctaaccgtgcttaatatgaaa
gacgatcccttagtgaaaagggtaggtatggtgaaaaacgccaagcgcgatatgtcagtg
gctgggcaagcactttggactgacgtgttacaccactaccaaaggtag
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