Alteromonas sp. Mac2: AV940_05260
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Entry
AV940_05260 CDS
T05899
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_05260
Enzymes [BR:
alz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AV940_05260
DNA repair and recombination proteins [BR:
alz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AV940_05260
Prokaryotic type
AV940_05260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMJ89925
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All DBs
Position
1298681..1300126
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AA seq
481 aa
AA seq
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MTVPVSIMWFRQDLRVKDNPALNAACDEGKIIPIYIYDDNAPDGRALGGASNWWLHHSLN
SLNDRLNGHLKVFKGDPKALIPALMEAYEAKGIYWNRCYEPWQINRDKAIKKQLLDYEFE
AHSSNGSLLWEPMKVLKKDGTPYRVFTPYYRKGCLNVEPPRYPQAPPARITYADVDDSKN
SKTYRPCGIDALNLLPSLDWDSEFKNHWKPGEDGAADNLQNFIEHSARKYKDARDIPSMN
GTSHLSPHLHFGEVSPNQAWYAIKDRFETTEDKSIDTYLSELGWREFSYYLLYHFPTIPN
KNFNDKFDKFNWRRDAKSLKAWQKGQTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKN
LLISWHEGERWFWDCLVDADLASNTAGWQWVAGTGADAAPYFRIFNPLLQGEKFDKQGKY
VRKYCPELADLPDKYIHKPWDAPPVIAKDAGVHLGDNYPKPIVDLKASRQRALDAFQALK
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtgccagtgtcgataatgtggttcagacaggaccttagagtaaaagataacccc
gcgttaaatgcagcctgtgatgagggaaaaataatcccgatttacatttacgatgacaat
gcacctgatggtagagcattgggaggcgcaagcaattggtggttacatcattcgttgaat
tcattgaacgacagattaaacggtcatttaaaagtattcaaaggcgatcctaaagcgctt
atccccgcattaatggaagcctatgaagcgaaaggcatctattggaatcggtgttatgag
ccttggcaaattaatcgagataaagccattaaaaagcagctcttagattatgaatttgag
gcgcatagtagtaatggtagtttgctgtgggaaccgatgaaggtgctaaaaaaagacggc
actccataccgagttttcaccccgtattatcgaaaaggttgtttaaacgttgagcctcca
cgctaccctcaggcgccgccagctcgcattacatacgccgatgtggatgatagtaagaac
agtaaaacttaccgcccttgcggtatagatgcactgaacttacttccatcacttgattgg
gacagtgaatttaagaatcactggaaaccgggtgaagacggtgcggctgacaatttacag
aatttcattgagcactctgcgcgtaaatataaagatgcgcgagatattccatcaatgaat
ggaacgtctcatctgtcacctcatctgcactttggcgaggtatcgcctaatcaagcgtgg
tatgccattaaagatagatttgaaaccactgaagataaaagcatagacacgtacttaagt
gaattaggctggcgcgagttcagttactatttgctgtaccattttccaaccataccgaat
aaaaacttcaacgataagtttgataaattcaattggcgacgtgatgccaaatctcttaaa
gcctggcaaaaagggcaaaccggtattcctattgtggatgcgggcatgcgcgagttatgg
caaacggggtatatgcacaatcgcgttcgtatgattgtaggctcgttcttagtcaaaaac
ctgcttataagctggcacgaaggcgagcgctggttttgggattgccttgtagacgctgat
ttagccagcaataccgcaggttggcaatgggtagcaggcaccggcgctgacgctgcaccg
tatttcagaatttttaacccattactacaaggcgagaaattcgataaacaaggcaaatac
gtaagaaagtactgccctgaacttgccgaccttcccgataagtacatacacaaaccttgg
gatgcaccaccggttattgctaaagatgctggtgtccatttaggtgataattatcctaaa
cccattgtagatttaaaagcatcgaggcagcgtgcccttgacgcatttcaagctttgaaa
gagtag
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