Alteromonas sp. Mac2: AV940_05615
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Entry
AV940_05615 CDS
T05899
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alz03032
]
AV940_05615 (ihfB)
03036 Chromosome and associated proteins [BR:
alz03036
]
AV940_05615 (ihfB)
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_05615 (ihfB)
DNA replication proteins [BR:
alz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AV940_05615 (ihfB)
Chromosome and associated proteins [BR:
alz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AV940_05615 (ihfB)
DNA repair and recombination proteins [BR:
alz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AV940_05615 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AMJ89992
LinkDB
All DBs
Position
complement(1367467..1367754)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLADQARQIPAKDLELAIKELLEQMAQTLQKGDRIEIRGFGSFSLHYRAPRV
GRNPKTGETVELDGKYVPHFKPGKELRERVDASIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaacggctcgcggatcaagcgcgtcaaattcctgcgaaa
gatcttgaactggcaattaaagagcttctcgaacagatggcccagacccttcaaaaaggc
gataggattgaaattcgaggattcggtagcttttcattacattaccgcgctccgcgcgtg
ggacgtaacccgaaaactggcgaaacagtagagttagatggcaaatatgtccctcacttt
aagccaggtaaagagcttcgagaaagagtagacgcctccatagcttaa
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