Alteromonas sp. Mac2: AV940_06135
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Entry
AV940_06135 CDS
T05899
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alz03000
]
AV940_06135
Transcription factors [BR:
alz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AV940_06135
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_23
HTH_Tnp_ISL3
HTH_10
HTH_28
MarR_2
HTH_IclR
HTH_5
HTH_Crp_2
HTH_3
HTH_38
MarR
HTH_29
HTH_24
HTH_AraC
Sigma54_DBD
HTH_11
HTH_36
HTH_Tnp_4
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AMJ90085
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Position
1483185..1484192
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AA seq
335 aa
AA seq
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MKIMKKRTTISDIAAHLGIHKTTVSRALKDSSSISKALSLKIKKAAKDLNYIPNRAAQSL
SIQNNKTIALLLPSFGNNVFNDVVSGVKAVADELGYALMIGDATYSELGEERIVESYIQQ
AVSGFILTSSRHTDETIKMLKTTDAPVAEIMDMSDSTFDINYGVDHFNAGKEMTDYLVNV
KGRKKIAFCSLLLDWRAVLRKRGWEQALHNAKLQDDMCLQSRADASFQAGAELLVESLHK
WPDLDAIFFVSDELAAGAVMECNRRGIKPGKDIDICGFNDLSFAKAIYPSLTTVSTPRRE
MAELATRSLISVIEGKSVSETRKVFPYHIKIRETA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatgaaaaaacgtacaaccatttcagatatcgcagcacatttaggtattcac
aaaactacggtttcccgcgcacttaaagattcaagtagtatttctaaagcgttatcgctg
aaaataaagaaagcggctaaggacttaaattacatccccaaccgtgcagcacaaagttta
tctattcaaaacaataaaacgattgcgttactactcccttcatttggaaacaatgttttt
aatgatgtagtttcaggcgtgaaagccgttgctgatgaacttggctatgcattaatgatt
ggtgacgctacctattcagaattaggagaggaacgtattgttgaatcttatattcaacaa
gcggtttcaggttttattctcacttctagtcgccacaccgacgaaaccataaaaatgtta
aaaaccaccgatgcaccggtggcggaaattatggatatgtcggattctacttttgatatc
aactatggtgtagatcatttcaatgcgggaaaagaaatgactgactatttagtaaacgta
aagggcagaaagaaaattgctttttgttcattgctgcttgattggcgtgctgtacttaga
aaacgaggctgggagcaagcccttcataatgcaaagttgcaagatgatatgtgccttcag
tcacgtgctgatgcctcatttcaagcgggcgctgaattactagtggaatcgcttcacaaa
tggccagacttagatgccatattttttgttagtgatgaacttgcagccggagctgtaatg
gaatgcaatcgccgggggatcaaaccgggaaaagacattgatatatgtggtttcaacgat
ttgagctttgcgaaagctatttacccttcccttaccacggtatccacaccaagaagggag
atggctgaattagccacccgttcattgatatcagttattgaaggtaaaagtgtaagcgaa
acacgtaaagtgtttccttaccatattaaaattagggaaaccgcctag
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