Alteromonas sp. Mac2: AV940_06295
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Entry
AV940_06295 CDS
T05899
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alz
Alteromonas sp. Mac2
Pathway
alz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AV940_06295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alz03019
]
AV940_06295
03016 Transfer RNA biogenesis [BR:
alz03016
]
AV940_06295
Enzymes [BR:
alz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AV940_06295
Messenger RNA biogenesis [BR:
alz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AV940_06295
Transfer RNA biogenesis [BR:
alz03016
]
Prokaryotic type
tRNA degradation factors
AV940_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
LppA
Motif
Other DBs
NCBI-ProteinID:
AMJ90115
UniProt:
A0AAC8XRC3
LinkDB
All DBs
Position
complement(1516280..1518391)
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AA seq
703 aa
AA seq
DB search
MTPITKSFQYGQHTVTLETGVIARQATAAVMASMDDTAVLVTVVGKKEAKADQDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFKNEVQVVITVMSAN
PDIPTDIISMIGTSAALAISGIPFNGPIGAARVGYTDGEYILNTRVEEQADSDLDLVVAG
TEGAVLMVESEADVLSEDVMLGAVMFGHEQLQTVVTAVKEFAANVSIDKWDWKPEAENTT
LKDKVKALAEAEMVAAYQISDKLARKDAVTAATEKARDAILAEDETQDKKEVSNLLHDLE
SDVVRSRILAGEPRIDGRDPKMIRALDVATGILPRTHGSAVFTRGETQAIVAATLGTERD
AQMIDELQGRRDSRFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQAVMPSEEEF
PYVVRIVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDENFVVLSDI
LGDEDHLGDMDFKVAGTTGGITALQMDIKIEGITKEIMQIALKQAKEARLHILNVMDEAI
GGHREELSEFAPRIYTVKIDQDKIRDVIGKGGAMIRSITEESDTNIEIEDDGTIKIFATE
RAKADIAISKIEQVTAEIEVGKTYHGKITRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VTDYLTEGAMIDVKVMEIDRQNRVRLSIKELLEKPAPKSDDAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactaaatcatttcagtatggacagcatactgtaacactagaaacgggc
gttatcgctcgtcaggccacagcagccgtcatggcaagtatggatgacaccgctgtatta
gttaccgttgtaggtaagaaagaagcgaaagcagatcaagatttcttcccactaacagta
aactatcaagaaaaaacatatgctgcgggtaaaatccctggtggtttcttcaagcgtgaa
ggtcgtccttctgaaggcgaaacccttacagctcgtttgattgaccgtccaatccgtcca
ttattccctgaagggtttaaaaacgaagtacaagttgttatcacggtaatgtctgctaac
ccagatatcccaactgatatcatctctatgattggtacttcagcagcactagccatttct
ggtattccatttaatggtccaattggtgcagcacgcgttggttacactgacggcgaatac
attctaaatactcgtgttgaagaacaagctgacagcgatctagatcttgttgttgctggt
actgaaggcgcggtattaatggttgaatcagaagccgatgtgctttctgaagacgttatg
cttggcgcagtaatgttcggtcacgaacaactacagacggtagtaaccgcagttaaagaa
tttgctgctaacgttagtatcgacaagtgggactggaaaccagaagcagaaaatacaacc
cttaaagataaagtgaaagcactagctgaagctgaaatggttgctgcttaccaaatctct
gacaagcttgctcgtaaagatgcagtaactgctgcaactgaaaaagcgcgtgatgccatc
cttgctgaagacgaaacccaagacaagaaagaagtatcaaaccttcttcatgatcttgag
tctgacgtagttcgttcacgcatccttgctggcgagcctcgcatcgacggtcgtgatcct
aagatgattcgtgcactagacgttgcaacgggcattttaccacgtactcacggttctgct
gttttcactcgtggtgaaactcaagcaatcgttgctgctactttaggtacagaacgtgac
gcgcagatgattgacgagcttcaaggccgtcgtgacagccgcttcatgcttcattataac
ttccctccatactgtgttggtgaaaccggtatgattggttctccaaagcgtcgtgaaatt
ggtcacggtcgtttggcgaagcgtggtattcaagcggtaatgccaagcgaagaagaattc
ccgtacgtagtacgtattgtttctgaaattacagaatcaaacggttcatcttcaatggct
tctgtatgtggtacttcacttgcgcttatggatgcaggtgtaccaattaaagcttcagtt
gctggtattgcaatgggtctagtgaaaagcgacgaaaacttcgttgtactttcagacatc
cttggtgatgaagatcaccttggtgatatggactttaaagttgctggtactactggcggt
atcactgcattgcagatggatatcaaaattgaaggtatcactaaagaaatcatgcaaatt
gcccttaaacaggcaaaagaagcacgtttgcatattcttaacgtaatggacgaagctatt
ggcggtcaccgcgaagagcttagcgaattcgcgccacgcatttacacagttaaaatcgat
caggacaagatccgcgatgttatcggtaaaggcggcgcgatgattcgttcaattactgaa
gaatctgataccaacatcgaaattgaagacgatggtactatcaaaatctttgcaactgag
cgtgctaaagccgatattgctatcagcaagattgagcaagtgactgctgaaatcgaagtg
ggcaaaacttaccacggtaagattacccgtatcgtagatttcggtgcgtttgttgaagta
ttaccaggcaaagaaggcctagtacatatttctcaaatcgctcacgagcgtgttaacaaa
gtaactgactaccttactgaaggtgcgatgattgacgtgaaagtgatggaaattgaccgt
caaaaccgtgtacgtctaagcattaaagagttacttgaaaagccagctcctaagtctgac
gacgcagagtaa
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