Alteromonas sp. Mac2: AV940_07215
Help
Entry
AV940_07215 CDS
T05899
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
alz
Alteromonas sp. Mac2
Pathway
alz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AV940_07215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_07215
Enzymes [BR:
alz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AV940_07215
DNA repair and recombination proteins [BR:
alz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AV940_07215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF1801
Hpf1_C
Motif
Other DBs
NCBI-ProteinID:
AMJ90279
LinkDB
All DBs
Position
1730659..1731468
Genome browser
AA seq
269 aa
AA seq
DB search
MKVISFNINGIRARLHQLQALIDAHQPDIIGLQEIKVHNEQFPVEAVEAMGYHVYFHGQK
SHYGVAFLAKKEPESVLMGFPTDEEDAQRRMIILKTTDSDGQPVTVLNGYFPQGENEKHE
TKYPAKRKFYKDLMTYLDTHHTPDENVIVMGDVNISHTDSDIGIGEENKKRWLRTGKCSF
LPEERVWLNTLMDWGFEDSFRTLNPDTTDRYSWFDYRSKGFNDNRGLRIDLILATPSMHN
RLSDAGIDYELRGIEKPSDHAPIWATYSK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatctcatttaatatcaatggcattcgcgcccgtcttcatcaacttcaagca
ttaatagatgcacatcagcctgacattattggcctgcaggaaataaaagttcacaacgaa
cagtttcctgtcgaagcagttgaagcgatggggtatcacgtttattttcatggtcagaag
agtcactacggtgtggcctttttagcgaaaaaagagcctgagtcagtgcttatgggcttt
cctaccgatgaagaagatgcacagcgtcgcatgatcatattgaaaaccactgacagcgac
ggccagcccgttaccgtattaaatggctacttcccgcaaggcgaaaacgaaaagcacgaa
accaaatatccagcaaaacgtaagttttataaagatctgatgacttacctagacacccac
catacgccagatgaaaatgtcattgtaatgggcgatgtgaacatctcccataccgattca
gatattggaattggcgaagaaaataaaaagcgctggttgcgcaccggcaaatgtagcttt
ttacccgaagaaagagtgtggttgaacacactgatggattggggttttgaagacagcttt
agaacattgaaccctgatacaaccgacagatactcgtggttcgattatcgctcaaaaggt
tttaatgataatcgtgggcttcgtattgatcttattttagctaccccatctatgcataac
agattgagtgatgccggaatagattatgaacttcgcggcattgagaaaccatctgatcat
gcgcctatttgggctacttacagtaaataa
DBGET
integrated database retrieval system
