Alteromonas sp. Mac2: AV940_08030
Help
Entry
AV940_08030 CDS
T05899
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alz02000
]
AV940_08030
Transporters [BR:
alz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV940_08030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AMJ90424
LinkDB
All DBs
Position
complement(1928108..1930411)
Genome browser
AA seq
767 aa
AA seq
DB search
MSLTTHMQRYPRSICAAAVASALLISPSTSAQDADADNINEKGKLERIEVTARKTVESLQ
ETPVAITSIGAVELAEKGISVLTEVQQFSPNTTLQTSRGTNSTLTAFIRGLGQQDPLWGY
EPGVGIYVDDVYIARPQGAVLDLLDVQRIEVLRGPQGTLYGKNTIGGAVKYVTKEMSGET
QLNVQATLGSYSQRDLKVTGQIPLVEDTVYLGLGYANLNRDGFGEYLVSALDGQDKENYN
KDLWAARLTLEVHASDDLFFRFGWDKTEDTSNAKGGYRLIPSILTDAPVPDSKFDSYTSL
PTWNKVELEGYNWLARYNVSDNLELKYIGSHRESYSPTNIDFDNTALPIFDVPAEYDDSN
DTHELQLNYTGNSYSLVSGLYLYDGESCGNFDAVLGVLGVALGASGLTREVSGCNNSESW
AAYAQFNYDINDKLSLSLGARYTDEEKSATVNNGLIFANVYPYTDWFDGYVRPDGDLVPQ
VLGTDSDGDGVFEGAAVESWSRFTPRVGVEYQMSRDTLFFASYSQGFKSGTFNPRATVNE
PGVEPEVVDSYEVGMKSDLNDALRLNVTLFSYDHSDRQYIGIEGDLSDPTALDQRLRNAA
ETAAKGAEVEMTWVASDNLQFDVAYGYIDFEIKKNNAIPPLIGLASTPENTLNIGANYLL
ETGFGDITFNANYYYRDDYLLFETSDLIEQDAYGMVNLSARWESVEGDWYAGLHMKNLTD
EEYLVGGYDFVTRDEDGNFGPGLGGDTTLIGYYGDPRTIHVTLGYRF
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcactacacacatgcagcgttaccctcgctctatctgtgcagctgctgttgcg
agcgcactgttaatttcaccttccacctctgctcaagacgcagatgctgacaatattaac
gagaagggcaaactggaacgtattgaagttaccgcacgaaaaaccgttgaatcgttgcag
gaaacccctgtggctatcacctctattggggctgttgaattagccgaaaagggcattagc
gtactcactgaagttcagcagttttcacctaacactacattgcaaaccagccgtggcacg
aactctaccttaactgcgtttattcgtggtttaggtcagcaagatccgctttggggatac
gagcctggtgtagggatttacgttgacgatgtttacatagctcgcccacaaggtgcggta
ctcgatttattagatgttcagcgcatagaggtactacgagggccgcagggtacactttat
ggcaaaaatactattggtggggcagttaagtatgtcaccaaagaaatgtcaggggaaacc
cagttaaacgtgcaagctacccttggtagttatagccagcgggatctaaaagtcactggg
caaattccattagtagaagatactgtgtatttgggcttaggctacgcaaacttaaaccgc
gatggttttggtgaatatttagttagcgcattagacggccaagacaaagaaaactacaac
aaagatttatgggcagcgcgccttacgctagaagtacacgctagtgatgatttatttttc
cgtttcggctgggataaaaccgaagatacctcgaatgcaaaaggtggttatcgtcttatc
cccagcattttaaccgacgcgccagtgcctgattcaaagttcgattcgtacaccagttta
cctacttggaataaagtagaacttgaagggtataactggctagctcgctataacgtaagt
gataatttagaacttaaatacataggttcacaccgcgagagttactcgcccacgaatatt
gattttgataatacggcattgccaatttttgatgttcctgccgagtatgacgacagcaac
gacacccatgaattacaactaaattacacaggaaatagctactcgctagtatctggctta
tatctttatgacggtgagtcatgcggaaactttgacgctgttttaggtgtattgggtgtg
gcgctaggcgcttctggcttaacccgagaagtaagcggctgtaataactcagaaagttgg
gcagcttatgcgcagtttaattacgatatcaacgacaagctttctctctcactcggtgcc
cgctacacagacgaagaaaaatcggcaacagtaaataacggcttaatcttcgcgaatgtt
tacccttatacagattggttcgatgggtatgttcgcccagatggtgacttagttccgcag
gtgctgggcactgacagcgatggtgatggagtatttgaaggagctgcagtggaaagttgg
tcgcgtttcacgccgcgggtgggcgtggaataccaaatgagccgcgataccctatttttt
gcgagttattcgcaaggcttcaaatcgggcaccttcaatccacgcgctacggtaaacgag
ccaggggttgaaccagaagtcgttgatagctacgaagtgggcatgaaaagcgatttgaat
gatgcattgcgattaaatgtgacattattctcgtacgatcattcagaccgacaatatatt
ggtatcgaaggtgacttaagcgacccaactgcacttgatcaaaggctacgtaacgctgcc
gaaacggcggccaaaggtgctgaagtagaaatgacatgggtagcttctgataacttgcaa
tttgatgtggcttacgggtatatcgattttgaaattaagaaaaacaacgcaataccccca
cttattggtttggctagcacacctgaaaatacgttgaatattggcgcaaattatctacta
gaaaccggctttggtgatattacgtttaatgccaattactattatcgtgatgactaccta
ctatttgaaaccagcgatcttattgagcaagatgcttatggcatggtgaacttaagtgcg
cgttgggagagtgtagaaggcgactggtatgctggccttcatatgaaaaatcttaccgat
gaagaatatttggtgggtgggtatgattttgttacccgagacgaagacggtaactttggg
ccgggcctaggcggtgataccacgttaattggctattatggtgacccacgtacgattcac
gttacgctaggttatcgtttttaa
DBGET
integrated database retrieval system
