KEGG   Alteromonas sp. Mac2: AV940_09680
Entry
AV940_09680       CDS       T05899                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
alz  Alteromonas sp. Mac2
Pathway
alz02020  Two-component system
alz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:alz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AV940_09680
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AV940_09680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alz03021]
    AV940_09680
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:alz02035]
    AV940_09680
Transcription machinery [BR:alz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AV940_09680
Bacterial motility proteins [BR:alz02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AV940_09680
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 GerE CT_C_D HTH_38
Other DBs
NCBI-ProteinID: AMJ90717
LinkDB
Position
complement(2302043..2302774)
AA seq 243 aa
MNSKAAAYQQQTDKSQLVERHASLVKRIAHHLMARLPASVLVDDLIQSGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHKNGRAITEAISQVEGETGRDARDVD
IAAKMNVSMQDYHQMLNEVNAGKLVGIEDLGVSEDVISTEKNRGSDAPLEDLMQGAFQKA
LAHAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKSRMKSWQV
DEE
NT seq 732 nt   +upstreamnt  +downstreamnt
ttgaatagcaaagcagccgcttatcaacagcaaacggacaagtcacaattagttgagcgt
cacgcttcgctggtgaagcgaatagcacaccacttaatggcgagattaccagccagtgtt
cttgtcgatgatttaatccagtcaggtatgattggactgctagaagctgcacgaaatttt
gacggttccaaaggtgcaagtttcgaaacctttgcaggtattcgtattcgcggcgccatg
cttgatgaaataagaaaaggtgattggacacctcgttctgttcataaaaatggaagggca
atcaccgaagctatctctcaagttgaaggtgaaacaggccgagacgcgcgagatgttgat
attgcagctaaaatgaatgtcagcatgcaagattatcatcaaatgcttaacgaagtgaat
gctggaaaattggtgggtattgaagacctaggtgtttctgaagatgttatttctacagaa
aaaaaccgaggcagcgatgcaccgttagaagatttgatgcaaggggctttccaaaaagcg
ctagcacatgctattactacattacccgaacgggaagcgattgtactttctttatactat
gatgaagaactgaaccttagagaaattggtgaagttcttgatgttagtgaatcgcgagtg
agtcaaattcatagtcaggccatgttaaaactcaaatcacgaatgaaatcgtggcaagtt
gacgaagaatag

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