Alteromonas sp. Mac2: AV940_11960
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Entry
AV940_11960 CDS
T05899
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alz03000
]
AV940_11960
Transcription factors [BR:
alz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AV940_11960
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_41
TetR_N
AIRS
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AMJ91124
LinkDB
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Position
2835653..2836648
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AA seq
331 aa
AA seq
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MATIRDVAREAGLSTGTISKALSNPDKISKKNLAKVQSAIAKLNYKPNMLAQKFRSKRSN
TIVVMVPDIANLFFANVISGVETVAQAAGFSVLLGDTKDSVAREKQFINMVETRLADGLI
NLRPYRPNDALLPKEDVLSVAASSCENTPSYSVRIDNVGAMHKVVSYLLSQGHKRIGVIT
GLKENPHTIDRLNGYKKALEEADIEYDQAIVIEGDFNYWSGLSAAEQFCKMDNRPTAICS
FNDEMAIAAIKGFNDKGLKIPQDISVTGFDDMEVSKYAIPTLTTVSQPAAKIGERSAELL
FSLIKGEPPALVEHILPYEFIIRESTAPPKK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgactataagggacgtagctcgagaagctgggctatcgacaggaactatttcaaaa
gcattgagcaatccagataaaatctcaaaaaaaaatctggctaaggtacaaagcgcgata
gctaaacttaactataaacctaatatgttagcgcagaagttcagaagcaaacgttccaat
acaatagttgtaatggttcctgatatcgccaacttgtttttcgctaacgttattagtggg
gtggaaactgtggcacaggccgcaggttttagtgttttacttggcgatactaaagactcc
gttgcacgtgaaaaacagtttatcaacatggtggaaactagattagccgatggcttaatt
aaccttcgtccatatcgaccaaatgacgcgctcctaccgaaagaagatgtactatctgtt
gcagcaagtagctgtgaaaatacaccgtcctactcagtaagaattgataacgtgggagcg
atgcacaaggtcgtaagttaccttttgtcacaaggacataaacggatcggcgtcataact
ggtcttaaagaaaatcctcataccattgaccgtttgaatggatacaaaaaagcacttgag
gaagctgatatagaatacgaccaggcgattgttattgaaggagattttaactattggtct
gggctcagcgcagccgagcaattttgtaagatggataatcggcctacagctatttgctca
tttaatgacgaaatggcaatagccgcaattaaaggcttcaatgacaaaggcttaaaaatt
cctcaagacatctctgttactggttttgatgatatggaagtttcaaaatacgctatccca
acattgaccactgtttcgcaacctgcagcaaaaataggcgaacgatcagctgaattgctt
ttttcgttgataaaaggcgagccccctgcgttggttgaacatattctcccttacgaattc
atcattagagaaagcacagcacctccgaaaaagtaa
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