Alteromonas sp. Mac2: AV940_12395
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Entry
AV940_12395 CDS
T05899
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alz03016
]
AV940_12395
Enzymes [BR:
alz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AV940_12395
Transfer RNA biogenesis [BR:
alz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AV940_12395
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Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Fea1
Motif
Other DBs
NCBI-ProteinID:
AMJ91206
UniProt:
A0AAC8XTW4
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All DBs
Position
complement(2944488..2945645)
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AA seq
385 aa
AA seq
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MQYELVTTFEHLNSVCNLAQQQKAVALDTEFVRTRTLSPQLGLIQLYDGHQLVLIDPLAI
DDLSPFIALMENTSVVKVLHSCSEDLETFLTAFNTVPTPVFDSQFAASILGLGASLGYAK
LVELLCDVSLDKGESRTDWIARPLREAQLSYAANDVLYLLPCYEHLVEKINEAGKLDWVY
QEIAQLADKKRSQMPEEFAYMQIKNNWRLSKEQLTVLQALAAWRLATARKKDMALNFVFK
EIHLYEAARLMPSSKSGLSQLHGVNPQSIRRYGETIITLISEARDKYAATSESLRLPKVS
RLIDVASYKQTLAALKAVSDKIASENDVSPEVIASKKQLNQVLKWYWFDSDETRVLGLKP
DVLSGWRAPLFEPHLEKLLGNKPSL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgaattagtaacaactttcgaacaccttaatagcgtttgtaacctagcccag
caacaaaaagcagtggcgctggacacagaatttgttcgcactagaaccctgtctccgcag
cttggtttaatccagttgtatgacgggcatcagttagtgctaatcgatccgcttgcgatt
gatgatctctcgccatttattgctttaatggaaaataccagtgtggtaaaagtgctgcac
tcatgctcagaagatctcgagacctttctgaccgcattcaacaccgtgccaacacccgta
ttcgatagtcaatttgctgccagtattctaggcttaggcgcatcgctaggctacgcaaag
ctggttgagttattgtgcgatgtaagcctagataaaggcgagtctcgaaccgactggata
gcgcgccctttaagagaagcgcagcttagctatgcggccaacgatgtactgtatttatta
ccttgctatgaacatttagttgaaaaaataaatgaagcaggcaagttagattgggtatac
caagagatagcccaattagccgataaaaagcgcagtcaaatgccggaagaatttgcttat
atgcagattaaaaacaactggcgtttatcaaaagagcaacttaccgtgctacaagccctt
gccgcatggcgactcgctactgcgcgcaagaaagacatggcattgaattttgtatttaaa
gaaatacatctttatgaagctgcacgtcttatgccttcaagcaagtcaggcttatctcaa
ctacatggggtgaacccacaatcgatcaggcgctacggtgagaccataatcacattaata
agcgaagctcgagataaatatgcggccacttctgagtcacttaggttacctaaagtcagt
cgtttaattgacgttgcaagctacaaacaaacgttagcagcgctaaaagctgtgagcgat
aaaattgccagcgaaaacgatgtatcgccagaagttattgcatctaaaaaacaattgaac
caagtgctaaaatggtactggttcgacagtgacgaaacccgagtgctaggccttaagcca
gatgtattatctggttggagagcgccgctattcgaaccccatttagaaaagttactaggc
aataaacctagtctctaa
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