KEGG   Alteromonas sp. Mac2: AV940_12885
Entry
AV940_12885       CDS       T05899                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
alz  Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:alz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alz03400]
    AV940_12885
DNA repair and recombination proteins [BR:alz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AV940_12885
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI Lon_C DnaB_C SLFN-g3_helicase RecA AAA_14 AAA AAA_22 GvpD_P-loop ABC_tran Viral_helicase1 AAA_24 Zeta_toxin nSTAND3 Rad51 AAA_16 KdpD cobW NTPase_1 AAA_29 FtsK_SpoIIIE DUF7125 DUF5906 Zn_ribbon_8 zf_UBZ
Other DBs
NCBI-ProteinID: AMJ91292
UniProt: A0AAC9AG57
LinkDB
Position
complement(3048227..3049594)
AA seq 455 aa
MAKRKTAYVCSDCGAEFPRWQGQCSECKAWNTISEFVVSSAKTNSKPTLSGYAGQTAAKI
EMLNAIDLESLPRFSAGFKELDRVLGGGIVPGAAMLIGGSPGAGKSTLLLQVMCQMAQTE
TALYVTGEESLQQVAMRAKRLNLPDDKLMMLAETSVETICELALTKKPKIMVIDSIQVMH
VADVQSAPGSVSQVRESAAYLTRFAKQHHISMFLVGHVTKDGNLAGPKVLEHCIDSSMML
EGESDGRYRTLRSHKNRFGAVNELGVFAMTEKGLKEVNNPSAIFLSRGENETPGSSVMVI
WEGTRPLLVEIQALVDYSQMSNPRRIAVGLDQNRLSMLLAVLHRHGNVQMNDQDVFVNVV
GGVKVSETSADLALLLAMVSSFRNRSLPKDLIVFGEVGLAGEIRPVPNGTERIIEAAKHG
FKRAIVPKANAPKQAVNGMKVIPVSQLSDALDALE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggcaaaacgaaaaacggcttatgtatgctcagattgtggggctgaatttccacgctgg
caggggcagtgttctgaatgcaaagcttggaacaccattagcgagtttgtagtcagtagc
gccaaaaccaattcaaaaccaactttgtcaggttatgctgggcaaactgccgctaaaata
gaaatgctcaatgcgattgatttggaatctctaccccgatttagcgcagggtttaaagag
ctcgatagagtattgggcggtggaatagtgccaggtgctgctatgttaattggcggctcg
ccaggggcaggtaaaagtacattgttacttcaggttatgtgtcaaatggcacaaaccgaa
accgctttatacgtaacaggggaagagtcgcttcagcaagtggcgatgcgagcaaaacgc
ttaaatctacctgatgataagctaatgatgttggcagaaaccagtgtagaaactatttgc
gaactggcgttaaccaaaaaaccaaaaatcatggttatcgactctattcaagtaatgcat
gtggccgatgtgcaatctgcaccgggcagtgtatctcaagttagagaaagtgcagcttat
ctaacccgctttgcaaaacaacaccacatctcaatgtttcttgtaggtcatgtaaccaaa
gacggaaacttagctggcccgaaagtgttagagcactgtattgacagttcaatgatgcta
gaaggggaaagtgatggtcgttaccgtacgttacgcagccataaaaaccgttttggcgct
gtaaatgaattaggcgtttttgcgatgacagaaaaaggcctaaaagaggtaaataaccct
tcggcgattttcttaagccgaggcgaaaatgaaacgcctgggtcgagcgtaatggtaatt
tgggaaggcacgcggccgctgttggtagaaatacaggctttggtggactactcacaaatg
tctaaccctcggcgaattgcggtggggctagatcaaaatcgattgtcgatgttgttagcg
gtattgcatcgtcacggtaatgtacaaatgaacgaccaagacgtctttgtaaatgtggtt
ggtggtgtgaaggtaagtgaaaccagcgctgacttggcgttactgctagcaatggtatcg
agttttcgaaatcgctctctacccaaagatttaattgtgtttggagaagttgggctagcc
ggagaaattaggcctgttcctaatggcaccgagcgcattattgaagccgctaaacatggt
ttcaaacgtgcgattgtgccaaaggcaaatgcgccaaagcaggctgtaaatggtatgaaa
gttattccagtatctcagctcagcgatgcgttagacgcattagaataa

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