Alteromonas sp. Mac2: AV940_14380
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Entry
AV940_14380 CDS
T05899
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alz02000
]
AV940_14380
Transporters [BR:
alz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV940_14380
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AMJ91563
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Position
3390947..3393508
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AA seq
853 aa
AA seq
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MQQAKFNASAFKLSLIAGAIAAIPFSTSPFAQEQQSIDEQDVEQIQIVGSRRVGRTVNDS
PVPIDIIDASSIEATGLTETNMILNSLLPSFNFPQPSVTDGTDHVRPAQLRGLAPDHTLV
LVNGKRRHTSALLNLNGSVGRGSSAVDLNAIPANAIKRIEVLRDGAAAQYGSDAIAGVIN
IVLKDASEGGEVSATYGANVTTMDGVPNLEGVSADADGNLAFNTGSDRELTDGQTFTLRG
NMGFEWGDDGFVNVSAEYRDRGESNRSDFDTRENYARDADGNLDEREFTVNRYNHVYGNG
EVEDYALFVNAGKAINDSIEFYGTAGFSSRDSIGGGFYRRASDSRNITSIYPDGFLPSIQ
TDIQDMSVLGGIKGYGDVWNYDLSLTHGGNALEYSVVNSLNTSLGPTSQTSFNAGELEYN
TTIINADASRLVDTGYFYSEMNFAMGAEYRHESYEITAGEENSYIQGTFGPGGVVTDPVD
GPFGSAGSQVFPGFTPESAGENTRHNYSFYVDVEADVLENWNVAVAGRYEDYSDFGSTFN
WKMSHRVTITDALALRASVSTGFRAPSLQQQHFTSIATVFVDGEPTETGTFAASSDVAQA
LGSPGLDAEESDNYSAGFTYSPTANFNLTVDFYRIDIDDRIVLSNNLSGDAIEALLEGTG
ANQARFFLNAINSRTEGVDIVSTYTLNTADFGAFNFNAGINFNDNEVTDILEAPEVLQGA
GFDQSNLFDDVELRRFETSSPDSKVNLGVTWSYDRYNATLRTTRYGEVEDPSSIEARNEI
IPSEWITDLDVRVALTDNLAVSVGANNIFDVYPEATRDLVDDVTTFSMIFPYSGFSPYGF
TGRYVYGKVTYSF
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggcaaaatttaacgcttctgcttttaagctttccttaatcgctggcgcaatc
gctgctattcctttttcgacttcacccttcgctcaagaacaacagagcattgacgaacaa
gatgttgaacagattcaaattgttggttcgcgccgtgtaggccgcactgttaatgactct
ccggttcctatcgatattatcgatgcgtcttctattgaagccactggtttaaccgaaacc
aacatgatcctcaattcgttgttgccaagcttcaacttcccgcagccttctgttactgat
ggaacagaccatgttcgccccgctcagcttcgtggcttagcgccagatcacacactggta
ttagtgaatggcaagcgccgccatacttcagcactccttaacctaaacggttctgtgggc
cgcggctcttctgctgtggatttaaatgctatacccgctaatgcgattaagcgcattgaa
gtattgcgcgatggtgcagcggctcaatacggttcagacgccattgctggtgttatcaat
attgtattgaaagacgctagcgaaggcggtgaagtatcagccacttacggtgcaaacgta
actactatggacggcgtgcctaaccttgaaggcgttagtgcagatgctgatggcaacctt
gcattcaatacaggttcagatcgtgaactgaccgacggtcaaacttttactcttcgcgga
aatatgggttttgagtggggcgacgatggttttgttaatgtttcagctgaataccgcgac
cgtggtgagtcgaaccgttcagacttcgatactcgcgaaaattatgctcgtgatgccgat
ggtaatttagatgagagagaattcacggttaaccgctacaaccacgtatacggtaatggc
gaagtagaagattacgccctgttcgtaaacgcgggcaaagccattaacgacagcatcgaa
ttttacggtactgcgggctttagttcacgtgattctattggcggcggtttttaccgcaga
gcatcagatagccgtaacatcacttctatctaccctgacggcttcttgccatctattcaa
accgatattcaagatatgtcggtacttggcggcattaagggttacggcgatgtgtggaac
tacgatttgtcacttacccacggtggcaatgctttagagtacagcgtagtgaatagcttg
aatacctctcttggtccaacaagccaaacaagctttaacgcgggtgagctggagtacaac
actaccattattaacgctgatgcatcgcgtttggtggatacaggctatttctatagtgaa
atgaatttcgctatgggcgcagaataccgccacgaaagctatgagattaccgctggtgaa
gaaaactcttacatccaaggtacgtttggcccaggtggcgtagttaccgaccctgttgat
ggcccttttggctcagctggctcacaagttttccctggcttcacgccagagtcagcaggt
gaaaacactcgtcacaactatagcttttatgtagatgtagaagccgatgtactagaaaac
tggaatgtggcagtagctggtcgttatgaagactattcagattttggcagtacctttaac
tggaaaatgtcacaccgggtaaccattactgatgccttggctcttcgcgcctctgtatcg
actggctttagagcaccgtcgttgcaacagcagcactttacttctattgccacagtattt
gtggatggcgagccaactgaaacgggtacgtttgccgcttcaagtgatgttgcacaggca
ttgggtagcccaggtcttgatgctgaagaatcagataactacagcgctggtttcacttac
tcgcctactgccaatttcaacctaaccgtagatttctaccgtattgatattgacgatcgt
attgtgttgtcgaacaacctatcgggtgatgctattgaagcgttgcttgaaggcactggt
gctaaccaagctcgcttcttcttaaacgcgattaattctcgcacggaaggagtagatatt
gtttctacttacacgttaaatacggctgattttggtgcgtttaacttcaatgcaggaatt
aacttcaacgacaacgaagtaaccgatattcttgaagcgccagaagtgctccaaggcgca
ggcttcgatcaaagtaacttgtttgacgatgtagaactgcgtcgtttcgagactagctcg
ccagatagcaaagtgaaccttggtgtaacttggtcttatgaccgttataacgctactttg
cgcactactcgctatggcgaggtggaagacccatcttcaattgaagcacgtaacgaaatt
ataccttctgagtggatcacagatttagatgtacgcgtagcccttaccgacaacttggcg
gtgtcggttggtgcgaataacatctttgatgtatacccagaagctacacgcgatttagtt
gatgacgtaactaccttctcgatgattttcccatactcaggcttctcgccctatggattc
acgggccgttatgtttacggaaaagtgacttatagcttttaa
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