Alteromonas sp. Mac2: AV940_14905
Help
Entry
AV940_14905 CDS
T05899
Name
(GenBank) DNA polymerase III
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
alz
Alteromonas sp. Mac2
Pathway
alz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AV940_14905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_14905
Enzymes [BR:
alz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AV940_14905
DNA repair and recombination proteins [BR:
alz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AV940_14905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
RICTOR_N
Motif
Other DBs
NCBI-ProteinID:
AMJ91659
UniProt:
A0AAC8XVK6
LinkDB
All DBs
Position
complement(3512726..3513520)
Genome browser
AA seq
264 aa
AA seq
DB search
MKTITIISVPGYDEWRIAARECLAQAIPPENIIWQTSESIQDDLFGGGEQVIAASKPKAK
HSIPKSVLTLIKYALCHQDASRFALCYRVLWRVIFENKNLIQLKTDEDIMQLVTLAKAVK
RDAYKISAFLRFREVNHDGQEHFIAWYEPEHFSLEIKLDFFQTRFKNMRWSILTPYRAAH
WDTEKLVLEDNPDPSVFPNDDRIEKYWLTYYANIFNPARIKKSAMLSSMPKKYWKNMPET
ALIDDMIRNSDARARKMIVDGNKR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccattacaatcatttcagtgcctgggtacgatgagtggcgcatagcagcaaga
gaatgtttggcgcaagctatcccccccgaaaatattatttggcaaacttcagagtctata
caagacgacctgtttggcggtggggaacaagttatagcagccagtaagccaaaagcgaaa
cacagcattcccaagtcagtcttaacgcttatcaaatatgcgttgtgtcaccaagatgct
agccgcttcgcattgtgttatcgggtgttatggcgtgttattttcgaaaacaaaaacctt
attcagttaaaaactgatgaagatatcatgcaacttgttacgttagccaaagcggtaaaa
cgcgatgcatataaaataagtgcttttttgaggtttcgagaagttaatcatgacggacaa
gagcactttatcgcttggtatgagccggaacattttagcttagagattaagctcgacttc
ttccaaactcgttttaaaaatatgcggtggtcaatattaacgccttatcgggctgcccat
tgggatactgaaaagctagttttagaagataatcccgatccgagtgtgtttcctaatgac
gaccgtatcgaaaaatattggctcacttattacgctaatatttttaatcccgcccgcatc
aaaaagagcgcaatgttaagctcaatgcccaaaaagtactggaagaatatgcccgaaaca
gctttgattgacgatatgattcgaaattcggatgcgagagcgcgcaaaatgatagttgat
gggaataaacgctaa
DBGET
integrated database retrieval system
