Alteromonas sp. Mac2: AV940_16600
Help
Entry
AV940_16600 CDS
T05899
Name
(GenBank) ligand-gated channel
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
alz
Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alz02000
]
AV940_16600
Transporters [BR:
alz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV940_16600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Vac_ImportDeg
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
AMJ91956
UniProt:
A0AAC8XVB0
LinkDB
All DBs
Position
3958130..3960187
Genome browser
AA seq
685 aa
AA seq
DB search
MSQFSLFRSTTALIILFFLSAISSSHADTFKHSDVQLNQEGHKDEHGEQKHDQREAHDDH
HDEVEKILIQATRSGRIADEQPIRVELINREEIEEKAAMRPGNISMLVAETGGVRMQTTS
PALGSANIRLQGLYGRYTQLLADGLPLYGNQAASIGLLQIPPTDLGRIEIIKGSASSLYG
GSALGGVINLVSRQPGDEFSGETLLNATTRDGQDLTTYFEAPINDSIKTSITAGAHYQNE
QDIDGDGWIDLAGYERYTARPRLFWEGEDGENLYVTTGFMTEQREGGTLEGATVANSEAF
AQTQDSKRIDGGFVFNKPVFDTLTFNARASAMLQEHEHAYGNDFDDDEHESYLAETSLAG
YTDKSDWVVGIAYQSEVFTSHTYPEFDYDYQVPGIFTQVDYELTDILTTSLSARVDEHNE
FGTQFSPRVSLLYRPGDITVRGSYGQGYFAPTPFVEEIEAAGLSRLASIEDLEEEDAETA
SLDVTYTLGNIETSLTLFGSNVDNVTELEAFSSNGTSELDRVRLVNAEGESKIRGSEFLV
RYYWRDVKLTASYLYVDATEVSETNEGRQEIALTPRHSAGFVAMWEQHGSFRTGFEAYYT
GVQRLNDNPYLNESKPYWHLGLMGEITLGRISYFINLENLLNVRQTDEHPLLLPNRAASG
QWTTDIWSRNDGFIANAGIRIKFGH
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaattttcactttttagatcaaccaccgcgttaatcattctgttctttcttagc
gcaatttcatctagtcatgccgacacatttaagcactcggatgtgcaattgaaccaagag
gggcacaaagatgagcatggtgaacaaaaacatgaccaacgtgaagctcatgatgaccat
cacgacgaggttgaaaagattcttattcaagcgacccgttctggccgtatagccgatgag
caacccattcgcgttgaactgattaaccgcgaagaaattgaagaaaaagcggcaatgcgt
ccgggaaatatctctatgctggtagcagaaaccggcggcgtaagaatgcaaaccacctcg
cccgctttaggcagtgccaatattagactgcaaggtttatatggtcgatatacccaattg
cttgcagacggtttaccgttatatggcaaccaagcagcttctatcgggctacttcaaata
ccacctaccgatttgggtcgcatcgaaattataaaagggtctgcctcttccctttacggt
ggctctgccttaggcggtgttattaacttagtgtctcgccagcccggcgatgagtttagt
ggcgaaaccttacttaatgccaccacgcgagacggccaagatctcactacctatttcgaa
gctcccattaacgattcaataaaaacgtcgattaccgcaggcgcgcactaccagaatgaa
caagatattgatggtgacggctggattgatttagcaggttatgaacgctacaccgctcgc
cctcgtcttttttgggaaggggaagatggcgaaaacctttatgtcactactggcttcatg
acagaacaacgtgaaggtggcacgctagagggtgcaaccgttgccaattcagaggcattc
gcgcaaacacaagattcaaagcgcattgacggtgggtttgtatttaacaaaccggtattc
gatacacttacctttaatgctcgcgcctcagcgatgcttcaagagcatgagcacgcgtac
gggaacgactttgacgatgatgaacacgagagctatttagccgaaaccagtctagctggc
tacacggataaaagtgattgggtggtaggcattgcttaccagtcagaggttttcacttcc
cacacatacccagaatttgattacgattatcaggttcctggtattttcactcaagtcgac
tacgagcttactgacatccttaccacatcgcttagcgcccgggtcgacgagcataacgag
ttcggcacccagttcagccctcgggtatcgttactttatcgtccaggcgatattacggta
agaggatcttatggtcagggctactttgctcctactccctttgttgaagaaatagaggca
gccggactatctcgcttagccagtattgaagatttagaagaagaagatgcagaaactgcc
tcgcttgatgtgacttatacgttaggcaatattgaaacgagcttaactttgtttggttca
aacgttgataatgttaccgagttagaggcattttcgagtaatggaacgagtgaactagac
cgagtcaggttagtgaatgctgaaggtgaaagtaaaattcgtggttccgagtttttggtg
cgctattactggcgtgatgtaaagctaaccgcgagttacctgtacgttgatgcaactgaa
gtatcagaaacgaatgaaggcagacaagaaattgcacttacaccccgccattcagcaggt
tttgtggccatgtgggaacagcatggcagtttcagaaccggttttgaagcctattacacc
ggcgtacagcgcttgaacgacaacccttatttaaatgagtctaaaccttactggcattta
ggtttaatgggagaaatcactctgggccgcattagttacttcattaacttagaaaaccta
ttgaatgtacgccaaaccgacgaacacccattgcttttgcctaaccgcgccgccagcgga
caatggactactgatatatggtcccgtaacgatggctttattgccaatgcaggaataaga
attaaatttggccactag
DBGET
integrated database retrieval system
