Alteromonas sp. Mac2: AV940_17250
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Entry
AV940_17250 CDS
T05899
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
alz
Alteromonas sp. Mac2
Pathway
alz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AV940_17250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alz03021
]
AV940_17250
03400 DNA repair and recombination proteins [BR:
alz03400
]
AV940_17250
Enzymes [BR:
alz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AV940_17250
Transcription machinery [BR:
alz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AV940_17250
DNA repair and recombination proteins [BR:
alz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AV940_17250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AMJ92073
UniProt:
A0AAC9F8V2
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All DBs
Position
complement(4126685..4127674)
Genome browser
AA seq
329 aa
AA seq
DB search
MVGSVTEFLKPRLVEIENVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKTEATLTLVKSGAGPVVAGDIQHDGD
VEIVNPDHLVCTLTGEAEISMRIKVEMGRGYVPASTRRSSEEDDRPIGRLLVDASYSPVE
RIAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRSATILAEQLDAFVDLRDVSEPE
AKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIAEKD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
attgtgggttctgtgactgaattccttaaaccgagactagttgagatcgaaaacgtttct
cctactcgtgccaaagtaactttggaaccactagagcgcggctttggccacactctaggt
aacgccctacgtcgtatcttgttgtcatccatgccaggatgcgcagttactgaagtagaa
attgatggcgttcttcacgagtacagcaccaaagaaggtgtgcaagaagacgtaattgaa
atcttgctaaatcttaaaggtttagcggttcgccttgaaggtaaaactgaggcaacccta
actctagtgaaatctggcgctggccctgttgttgctggtgacattcagcatgatggcgac
gtagaaattgttaaccctgaccacttagtttgtactttaactggcgaagctgaaatcagc
atgcgtattaaagtagaaatgggtcgcggttatgtaccagcttctacccgtcgctcctct
gaagaagatgatcgtccaattggtcgtttgttagttgatgcttcatacagcccagtagag
cgtatagcttacagtgtagagtctgcccgtgttgaacaacgcacagacctagacaaattg
attatcgatatggaaacgaacggcactttagatcctgaagaagcgatccgccgttctgcg
actatcctagctgaacagcttgatgcattcgtagatttacgtgatgtgtctgagccagaa
gcgaaagaagagaaaccggaatttgatccgattctacttcgcccagttgatgacctagag
ctaactgtacgttctgctaactgtttaaaagcagaagctatccagtacattggtgacctg
gttcagcgtactgaggttgagctacttaaaacgcctaaccttggtaaaaaatcgctaact
gaaatcaaagatgttctagcatctcgtggactttctctaggtatgcgcctagaaaactgg
ccgcctgagagcatcgctgaaaaagattaa
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