KEGG   Alteromonas sp. Mac2: AV940_17970
Entry
AV940_17970       CDS       T05899                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
alz  Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:alz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alz03400]
    AV940_17970
Enzymes [BR:alz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AV940_17970
    5.6.2.6  RNA 3'-5' helicase
     AV940_17970
DNA repair and recombination proteins [BR:alz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AV940_17970
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 EIF4E-T
Other DBs
NCBI-ProteinID: AMJ92202
UniProt: A0AAC8XV92
LinkDB
Position
complement(4289695..4292178)
AA seq 827 aa
MSKTKAPLNKAIKTGSDILPPAFSQWFKNKGWALRDYQRQMLEQDSHNTTLLIAPTGAGK
TLSGFLPSLVELAQSPQPGLHTLYISPLKALTQDIHRNLLQPIEEMELPITAETRTGDTP
SYKRQRQRKKPPNLLLTTPESLMLMLSYADADKLFGKLKRVIIDETHSLVANKRGDFLSL
ALARLSVLSPKMKRVGLSATVAYPETLGAWLAGTEGVANIISVKAGEKPKVEMLQSENRM
PFGGFMARYAITDIYKAIEDAKTTLVFVNTRAQSELIFQMLWEHNTAALPIALYHGSLSK
EQRRKTEAMMSSGLLRAVVCTSALELGIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLD
EPSEALLVPANRFEALECQAAIDAINKGELDGDAPQPGALDIIPQFIVNCLCSNADSPGT
LYEQILMASPYQGLDKQDFEKLWQFALDGGSALNAYERYQRLMQNEDGTFSPANRRVIQR
HRQNIGTIVEAGRLKVKRIRRGNQGKIIGEVEEYFAQQLTPGDTFYFAGEVLKYEAIRDM
QLHARPAKAKEPKIPSYSGGQMPLSTYLADGVRAILANPKSWRNLPAQVQEWLKLQQQFS
QLPEPEKVLVEQFPFRNVNHTLYYTFEGRKANQTLGMLVTRRMEKMEIKPLSFSVTDYGL
SISAVKQITDTQLQQLFQPDILGDELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHASQKT
MKQVTFSTDLIYDTLREHDPDHILLAVARADAERELLDLQRLANLLIRFVDKTTLVNLEK
VSPMAIPIVLNMRSEQIKGAGAQAIIEQADLYAEAENMLDEVRALLS
NT seq 2484 nt   +upstreamnt  +downstreamnt
atgtctaagaccaaagcaccacttaacaaagcaattaaaaccggtagtgacattttgcca
ccggcgtttagccagtggtttaaaaataaaggctgggcgcttcgagattatcaaaggcaa
atgctagagcaagactcccataacactactttgctcattgccccaaccggagctggaaaa
accttatcaggctttctacctagcttagtcgagttagctcaatcgccacagccaggcttg
cacaccttatacatttccccgcttaaagcgttaactcaagatattcatcgtaacttatta
caacctattgaagagatggaattgccgataacggcagaaacccgcactggcgatacaccg
tcgtataaacgacagcgccaacgaaaaaaaccgcccaatctgctacttaccaccccagaa
tctttaatgttgatgctgagctatgccgatgctgacaaactatttggcaaacttaagcga
gtcattattgatgaaacccatagcttggtggcaaacaaacggggagacttcctgtcttta
gcgctagcgcggctttcagtattgtcacctaaaatgaaacgggtaggcttgtcggccacg
gtagcttacccagaaacgctaggtgcatggcttgctggcacagaaggcgttgctaatatc
atcagcgtgaaagcgggtgaaaaacccaaagtagagatgctgcaatctgaaaaccgcatg
cccttcggtggttttatggcgcgttatgccatcaccgatatctacaaggccattgaagac
gcaaaaacgaccttggtgttcgttaatactcgggcgcaatctgaactgatttttcaaatg
ctgtgggaacacaataccgctgccttacctatagccttataccacggaagcttgagtaaa
gagcagcggcgcaaaacagaagccatgatgtctagcggcttgttacgggcagtagtatgt
acttcggcgcttgagctaggtattgattggggcgatgtagataaggtcattcaggtaggt
gcgcccaaaggtgttagccggttgctgcaacgtattggccgagcaaaccatcggttagat
gaacccagtgaagcgttgcttgtaccagctaaccgatttgaagcgctggaatgccaagcg
gctattgatgcaattaataagggcgagctagatggcgatgccccgcagccgggggcattg
gatatcatcccccagtttattgtgaattgcctatgcagcaatgctgacagcccaggcacc
ctttacgagcaaatactcatggcctcgccctatcaagggctagataaacaagattttgaa
aaattatggcagtttgcgttagatggcgggagtgcgcttaacgcatacgagcgatatcag
cgcctaatgcaaaacgaggatggcactttttcaccggccaataggcgggtgattcaacgt
catcgtcagaacataggcacaattgttgaggcgggtagattaaaagtaaaacggattcgc
cgtggtaatcagggcaaaattattggtgaggtagaagagtactttgcccagcaacttacc
ccaggcgatacgttttactttgctggtgaagtgcttaagtacgaagccattcgggatatg
caattacatgcacgccctgctaaagccaaagagcctaaaatccccagttattccggtggc
caaatgccactgtcgacatacttggctgatggggttagagccatactcgctaacccaaaa
agttggcgcaatttacctgcacaagtgcaagagtggttaaagttacaacagcagttttca
cagcttcctgaacctgaaaaggtgttggtggagcagtttccttttcgcaacgtgaaccat
acgctgtattacacattcgaaggtaggaaagcgaaccaaaccttgggcatgctggttacc
cgtagaatggaaaaaatggagattaagccgcttagctttagtgtgactgattatgggttg
tcgataagtgcagtgaagcagattaccgacactcaactacagcaactgtttcagccagat
atattaggcgatgagctagaagactggatgttacaggcgcccatgttaaaacgctctttt
aggcaggtggcagtagtaagcggcttaaccgaacagcgttatcatgccagccagaaaacc
atgaagcaggtaacgttttcaactgacttaatttacgacacgctgcgtgagcacgaccct
gatcacattcttttagcggtcgcgcgggccgatgctgaacgggagttgttagatttacag
cgcttagcgaatttgcttattcgctttgtagataaaaccacgttagtaaacttagaaaaa
gtatcgcccatggccataccgattgtgctgaatatgcgcagtgagcaaataaaaggggca
ggtgctcaggcgatcatcgagcaagccgatttatatgccgaagcagaaaatatgctagac
gaagtacgagctttgttgtcctaa

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