Anaplasma marginale St. Maries: AM245
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Entry
AM245 CDS
T00216
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ama
Anaplasma marginale St. Maries
Pathway
ama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ama03019
]
AM245
Messenger RNA biogenesis [BR:
ama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AM245
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
RNase_J_C
Lactamase_B_6
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AAV86352
LinkDB
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Position
complement(204370..205998)
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AA seq
542 aa
AA seq
DB search
MDFGSGFFFLPLGGVGKIGMNVTLYHAHGKWIIVDLGSGFADGDTMPGVDMVVADVSFIK
KKRKDLLGIVLTHAHEDHIGAIPYLWADLRCPVYTTKFTATLLRAKLAQFSMNVPIEEVD
PASKLELGPFVLEFVHMTHSTPEMHAVAVHTDFGSVLHTGDWKLDTDPVVGPMSDTDKLK
RLGDDGLLAVISDSTNIFTEGRSGSEGSLYENILSIVKASKRRVAVALFASNIARICTLS
KIAKASNREVVVLGRSLARAIQAARDCGYIDDSTEFLDAKQAGSIPAKNVLYLCTGCQGE
PLAATARLASKSHPLAELGEGDTVVFSSKIIPGNERRIFGVFNKLVRMGVEVVTEFTEGV
HVSGHPSREEVRTLYSLTRPKLCVPVHGEYMHMYEHVKLAKECGIKGCVVSAPGDVIDLV
EGKKVGSVGCGVFGIDGNFLRHPEGSVMSARRKMRNAGMVVVTLLMNREHELVKEPMVIA
PGALDSSEDRVLLSEMARKIGSGLSNSRPRNVKNYVKDVVFGSLKGILKDRPLVEVQMEY
VW
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggattttggtagcgggtttttttttctacctttgggtggcgtaggcaagataggtatg
aacgtcacgctgtatcatgctcacggaaaatggataattgttgatttgggctccgggttt
gctgacggcgatacaatgcctggggtggatatggttgtcgccgatgtcagctttataaag
aagaaacgcaaggatctgcttgggatagttttgacccacgcgcatgaagatcacataggg
gccataccctacctgtgggcggatctcagatgtcctgtgtacaccacaaagttcactgca
actttgctcagagcaaagttggctcagttttcgatgaacgtcccaattgaagaggtggat
ccagcatctaagttggagctggggccttttgtgcttgagttcgttcatatgacgcactcc
acccccgagatgcatgcggtggccgtccatacagattttggaagcgtgctccacactgga
gattggaagctagatactgaccctgttgtgggtcctatgtctgacacagacaagctcaag
cggcttggagacgacgggctgttggctgtaatttctgactcaaccaacatatttaccgag
ggcaggtcgggctccgaagggagtttgtatgagaacattctaagcatagtgaaagcgagc
aagcgcagggtggccgttgcgctttttgcctcaaacatcgccaggatctgcacacttagc
aaaattgccaaggcatctaaccgggaggttgttgtcctgggtaggtcgctagcaagggcg
atacaggccgcaagagattgcgggtatattgacgatagcacagagtttctcgatgcaaaa
caggctgggagtataccagccaaaaacgtgctgtacctctgcaccggttgtcagggcgaa
ccgctcgccgcgactgctaggcttgctagtaagtctcaccccttagccgagcttggtgag
ggagatactgtagttttctcttcaaagataattcctggcaacgagaggcgcatattcggg
gtttttaacaagcttgtgaggatgggcgttgaggtggtgacagagttcaccgagggcgtg
cacgtatctgggcacccgtcccgggaggaagttcgcactctgtattccctcacgaggccg
aagttgtgcgtccccgtacacggggaatacatgcacatgtatgagcacgttaagctagcc
aaggagtgcggcataaagggttgtgtggtttcggctccgggagacgtcattgacctggtt
gaggggaaaaaggtaggctctgtaggttgtggagtttttgggattgacggcaattttctg
cgccaccctgagggcagcgtgatgtctgcacgtaggaaaatgaggaatgccggaatggta
gttgtcaccctactcatgaatagagagcatgagctggtcaaggagccgatggtcattgcc
ccgggggcattagacagctccgaagacagagtgctgctgagcgaaatggcaaggaaaatc
ggttctgggctttctaactcaaggccgaggaacgtgaaaaattatgtcaaagacgtagta
ttcgggtccctaaagggtattttaaaggacagacccctggttgaagtgcagatggagtac
gtgtggtag
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