| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' chain
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| KO |
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| Organism |
ama Anaplasma marginale St. Maries
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ama00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM263 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:ama03021]
AM263 (rpoC)
03400 DNA repair and recombination proteins [BR:ama03400]
AM263 (rpoC)
Enzymes [BR:ama01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM263 (rpoC)
Transcription machinery [BR:ama03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM263 (rpoC)
DNA repair and recombination proteins [BR:ama03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM263 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
219929..224176
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| AA seq |
1415 aa
MKMLDLYGYTSIAQSFDKICISIASPESIRAMSYGEIKDISTTNYRTFKVEKGGLFCPKI
FGPVNDDECLCGKYRKKRYRGIVCEKCGVEVTSSKVRRERMGHIELVSPVAHVWFLKSLP
SRIGALLDMPMKSIESILYSGDFVVIDPMTTPFSKGEVISESVYNQARDAYGDEGFIALT
GAEAIRELLVRLDLGAIRAGLRSELESTSSEMKRKKVVKRLRIIENFIASGNRPEWMILT
VIPVLPPDLRPLVSLENGRPAVSDLNHHYRTIINRNNRLEKLLKLNPPAIMIRNEKRMLQ
EAVDGLFDSSRRSYVSSRAGSMGYKKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
GLKLHQCGLPKKMALELFKPFICSKLKMYGVAPTVKLANKMIQSEKPEVWDVLDEVIREH
PILLNRAPTLHRLGLQAFDPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPSNGRPIIVPSKDIVLGIYYLTLQRAQAPDQEVMSFGELSHVEYALH
EGIVHTSSKIKYRMQRCNSDGTIVSEVVETTPGRLILWQIFPQHKDLTFDLVNQVLTVKE
ITSIVDLVYRSCGQRETVEFSDKLMCLGFQYASQSGISFGCKDMIIPDTKAAHVENASEK
IKEFSIQYQDGLITRSERYNKVVDEWSKCTDLIARDMMKAISLSDEEGKLNSIYMMANSG
ARGSASQMKQLAGMRGLMAKPSGEIIETPIISNFREGLSVFEYFNSTHGARKGLADTALK
TANSGYLTRRLVDVAQDCTVVEYDCKTKDGVVARAVIEGGAVVATLDSVVLGRVAAVDTY
NPVTEELLLSAGELIDEGKVEKIRVAGLDAVRVRSPLTCESKKGICSLCYGRDLAVGDLV
SIGEAVGVIAAQSVGEPGTQLTMRTFHVGGTAMRGVEVSNLIAVLDAEVKLVNSNVVTDK
YGNQIVMSRSCEVVLLDSVGNEKMRHSVPYGAKLYVSDGQPVKMMDKMAEWDPYTIPIIT
EKTGTIKYVDLIYGVSINEVLDESTGISNRVVIDWKLHLQGANLRPRLVLLDEDGNIATL
YNDLEASYFVPIGAVLNVQDGQKVHAGDVITRIPRESIKTRDITGGLPRVIELFEARRPK
EHAIVSDVDGYVEFGKDYYRSKRRIFIRPVDKSLPAVEYLVPKGKHTIVNEGDFVHKGDL
LMDGDPDQHDILRVLGAEALASYMISEIQQVYRLQGVRIDNKHIEVILRQMLQKVEITDP
GDTMYLVGEHAGREEVMRLNRKLEEAGKKPVAYVPILQGITKASLDTNSFISAASFQETT
KVLTEAAFSGKEDPLYGLKENVIVGRLIPAGTGFIMNKVKKLAMLDQSDYATYYNSELRE
IMGDLGDELIAEGEAASPGRSGDGYLGNGGGVVDY |
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| NT seq |
4248 nt +upstreamnt +downstreamnt
atgaagatgttggatttgtacggctataccagcatagcgcagtcgtttgataagatttgc
atatccattgctagccccgagagcattagggcgatgtcctacggtgagatcaaggatatc
tctaccactaactatcgcacattcaaggttgaaaaaggcggccttttttgcccgaaaatc
tttggtcccgtaaatgacgatgaatgtctatgtggaaagtataggaagaagcggtatagg
ggcatagtatgcgagaagtgtggggttgaggtcacttcttccaaggtgagacgggagagg
atggggcacatagagctggtttcccctgtggcacacgtgtggtttttgaaatccttgcct
tcacgtatcggggcattgcttgatatgcccatgaagtccattgaaagcatcctctacagt
ggggacttcgtggttatcgatcctatgaccactccattctccaagggggaggttataagt
gaaagcgtatacaaccaagcccgcgacgcctacggagatgaaggttttatcgccttaacc
ggggctgaggccatacgggagttattggtaaggctggatcttggggccatcagagctggg
cttaggagcgagctggagtctacctcatctgaaatgaaaagaaaaaaggtggtcaaaaga
ttgcggatcatcgaaaacttcatcgcttctggcaatagaccagagtggatgatactaact
gtaatccctgtgctgccaccggacctgaggcctttggtgtctttggaaaatggtaggcct
gcagtttccgatctgaaccaccactataggacgattataaaccgtaataacaggctggag
aagctgctcaagctcaacccacccgcgattatgatccgcaatgagaagaggatgctgcaa
gaggccgtggatgggctttttgatagcagtaggcgcagctacgtttcaagcagggctggt
agcatgggctacaaaaagtctcttagtgacatgcttaagggaaagcaggggcggtttagg
cagaatttgctgggtaaaagggtagactattcgggtaggtctgtaatcgtcgttgggcct
gggttgaagttgcaccagtgtggcctgcccaagaagatggccctggagctcttcaagccg
tttatttgttccaagcttaagatgtacggagtggcgccgacggtgaagcttgcaaacaag
atgatccagagcgaaaagcccgaggtttgggatgttttggacgaagtaataagggagcat
cccatattgctaaacagggctcctaccctgcacaggcttggtctccaggcgtttgacccc
gtacttatagaaggtaaggccatacagctgcatccgcttgtgtgtagtgcgtttaatgcg
gacttcgatggggaccaaatggcggtacacgtccctctgtcacttgaagcacagcttgaa
gccagggtgttgatgatgtccacaaacaacattcttagcccttcaaatggtaggccgata
atcgtcccgtccaaggatattgtcctgggaatatattacctcacgctgcaaagagcacaa
gcgcccgaccaggaggttatgtcttttggggaattgagccatgtggagtacgccctgcat
gaggggatagtacacacgtcttccaagataaaatacaggatgcagcgctgcaatagcgac
ggcacaatagtgagcgaggttgttgagacgaccccgggcaggctgattctctggcaaatt
tttccccagcacaaggatctcacgttcgatctcgtgaaccaggtgcttactgtgaaggag
attacatctatagttgacttggtgtataggagttgcgggcaaagggagacggtggagttt
tccgacaagctcatgtgtctgggttttcaatatgcgtcacagtctggtatctcttttggc
tgtaaagacatgataattccagacaccaaggcggcgcatgtggaaaatgcgagtgagaaa
attaaggagttttctatccaataccaagacgggttgattacaaggagtgagcgctacaac
aaggtagtggatgagtggtctaagtgcacagacttgattgcccgggacatgatgaaagca
atctctttgtccgatgaggaagggaagctgaattccatttatatgatggcgaattccggt
gccaggggttccgcatctcagatgaagcagctggccggcatgcgtgggcttatggccaag
ccctcgggcgaaattatcgaaacccctatcatctcgaacttccgtgaggggttgagcgtg
tttgagtattttaattctacacacggggcgcgcaaggggctggctgacaccgcattgaaa
accgcaaactccggatacctgacccgtaggcttgtggacgtggcgcaagactgtacagtt
gttgagtatgactgtaaaaccaaggatggcgttgtcgctagggcggtgattgagggtggt
gccgtcgtggcgacgcttgacagtgtagtgctaggtagggttgctgcagtcgacacttac
aaccctgtgactgaggaattgctattaagtgctggtgagctgatagacgaagggaaggtc
gagaaaataagagttgctgggttagatgcggtgagagtgcggtccccgctgacatgtgaa
tccaagaaagggatttgctcgttgtgctatggtagagaccttgctgttggggatttggta
tcgataggtgaggctgttggtgtaatagctgcgcagtctgtgggtgagcctggtacacag
ctgaccatgcgtacgttccacgttggtggtaccgcaatgcgcggggtggaggtatctaac
cttatagctgtgctggatgccgaggtgaaattggtgaacagcaacgtggtgaccgacaag
tacggcaatcagatagtgatgagtcggtcatgtgaggtagtgcttctcgacagcgttggt
aatgaaaagatgcggcacagcgtaccatacggtgcgaagctctatgtttcagatgggcag
ccggtcaaaatgatggacaaaatggccgagtgggacccatacactatacccattattacc
gagaagacgggaaccataaagtatgttgacctcatctacggtgtgtccatcaacgaagtt
ttggatgagtctacaggtatatcaaacagggttgttatagactggaagttgcatctccag
ggggcgaacttgaggccgaggttggtgctgttggatgaagatggcaacattgctacctta
tacaatgatctggaggcgagttacttcgtgcctataggcgcggtgctgaacgtccaagat
gggcagaaagtgcacgcgggggacgtcataactaggattcctagagaatccatcaagacc
agagacattaccggggggctgcccagagttattgagctatttgaggcgcgccgtcccaag
gaacacgctattgtaagcgacgttgacggctacgttgagtttggcaaggattactatcgc
tccaagcgccggatattcatacggcctgtagacaaaagccttcctgcggtagaatatttg
gtgcccaagggtaagcacaccatagtgaacgagggtgactttgtgcacaagggtgatctg
ctcatggatggggatccggaccagcatgacatactcagagttttgggggcggaggctctg
gccagctacatgatttctgaaatacaacaggtatacaggctgcaaggtgttaggatagac
aacaagcacatcgaggttatcctcaggcagatgctgcaaaaggtggaaatcactgatccg
ggtgacacaatgtacctggtgggtgagcatgctgggcgcgaggaggttatgcgactcaac
cgcaaactggaagaagctgggaagaagcctgttgcatatgtgccgattctccagggtatt
accaaagcaagtcttgataccaactctttcatttctgcggcgtcgttccaggaaaccacc
aaggtcctgaccgaagccgccttttcaggtaaggaagatcctctgtacggattgaaggag
aatgtaatcgttggtaggctaatacctgcgggtacagggttcattatgaacaaagtgaaa
aagctggcaatgctcgatcaaagcgactatgcaacttactataatagcgaattgcgagag
atcatgggtgacctgggtgacgaattaattgcggaaggtgaggcagcctccccgggccgc
agcggtgatggctatctggggaatggcgggggagttgtagattactag |
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