Anaplasma marginale St. Maries: AM887
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Entry
AM887 CDS
T00216
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ama
Anaplasma marginale St. Maries
Pathway
ama03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ama00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AM887 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ama03021
]
AM887 (rpoA)
03400 DNA repair and recombination proteins [BR:
ama03400
]
AM887 (rpoA)
Enzymes [BR:
ama01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AM887 (rpoA)
Transcription machinery [BR:
ama03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AM887 (rpoA)
DNA repair and recombination proteins [BR:
ama03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AM887 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
IDH
YubE
Motif
Other DBs
NCBI-ProteinID:
AAV86799
UniProt:
Q5PA81
LinkDB
All DBs
Position
complement(819497..820597)
Genome browser
AA seq
366 aa
AA seq
DB search
MAISDNGGGSVGLCYGSEFSISDHWDKLTRPSSIKVVGDGDLSRSAELIVEPLESGFALT
LGNALRRVMMSSLRGFAVYGIEVEGVSHELTSLSGVREDVADLVLNLSMLRVKLLTSESR
VLRLVAKGPGEITAAAIGDSEGCVVLNKDLHICTLGKDVDFSMKIYVNSGKGYVPASEYR
AASRSGATSEVGPGFIATNALYSPVKKVAFRIESSRIGQFTDYDRLVISVETDGSISPDE
AVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYDHNLLRKVDELELSVRSHNCL
KNDNITYIGDLVQKTESDMLRTPNFGRKSLNEINEVLASMNLHLGMKVPNWPPESIENLS
KQYSED
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttctgataatggggggggctccgttggcttgtgttatggtagcgagttctcg
atctctgatcactgggataaactgaccagaccttcttccataaaggttgtgggtgatggc
gatctatcgcgctctgccgagctaattgtagagcccctggagagtgggtttgccctcacc
ttgggcaacgcgctcaggcgtgttatgatgtcttccctgagagggttcgctgtgtacggg
atagaggttgagggcgtgtcgcacgaactcacgtctctatctggggttcgggaagatgtt
gcggatttggtgctcaacctgagtatgttgagggtaaagcttttgacttctgaatccagg
gttctgcgtctcgttgctaaaggccccggggagatcactgcagctgctataggtgactcc
gaggggtgcgtggttctaaacaaggatttgcatatctgcaccttgggtaaagatgttgac
ttcagcatgaagatatatgtgaacagcggaaagggctatgttcccgcttctgagtacagg
gctgcctccagatctggcgctaccagcgaagttggcccggggttcattgccaccaacgcg
ctctatagtccggtaaaaaaggttgcattcaggatcgagagtagcaggataggccagttt
actgactacgataggcttgttatctctgttgagacggatggctctatatctccggacgaa
gctgtggccgtttctgccagggtgctgcaggatcagctgcagtcattcataggctctgag
gaagttgagggagaatccaggaagaaggttgacaaagaagagggggcgttaccctacgat
cataatctgctgcgcaaggttgatgagctagagctttctgtaaggtcccacaactgcttg
aaaaatgacaacataacgtatataggtgacctcgtgcagaaaacagagtctgacatgtta
cgcactcccaactttggtagaaagtctctgaatgagataaatgaggtcttggctagcatg
aaccttcaccttggcatgaaggttccgaattggccgcctgagtctattgagaatcttagt
aagcagtatagtgaggattag
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