Anaplasma marginale St. Maries: AM992
Help
Entry
AM992 CDS
T00216
Symbol
rho
Name
(GenBank) transcription termination factor RHO
KO
K03628
transcription termination factor Rho
Organism
ama
Anaplasma marginale St. Maries
Pathway
ama03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ama00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AM992 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ama03021
]
AM992 (rho)
03019 Messenger RNA biogenesis [BR:
ama03019
]
AM992 (rho)
Transcription machinery [BR:
ama03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AM992 (rho)
Messenger RNA biogenesis [BR:
ama03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AM992 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
OB_RNB
AAA
ATPase_2
NACHT
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AAV86882
LinkDB
All DBs
Position
complement(901852..903234)
Genome browser
AA seq
460 aa
AA seq
DB search
MVVLVGFSEENFMSEGVMEKEESIVKGGVTENPSEGGRVLNLCELKQKSTEELLVTAEEL
GVVSNGRMLKQEIIFQLMKRVISEGGIAIGGGVVETLPDGFGFLRSAKANYAASSDDIYI
SAGQIKKFNLRTGDIVSGEIRAPGEKERYFTLVKAYSINYTEIGKLQRYVHFDDLIPLYP
EERILLECKESFGGEKKDISMRAIDIIAPLGKGQRALIVAPPRVGKTVILQQIAHSIAMN
HPNMELIVLLIGERPEEVTDMLRSVKGEVVSSTFDEPAYRHVQLAEIVIERAKRMVEHKK
EVVILLDSITRLARAYNEVMPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTIIAT
ALIETGSKMDEVIFEEFKGTGNCEIILDRKIADKRIYPAIDISKSGTRKEDMLIESAFLK
KVWLLRRLLSAMGPVEAMEFLRDKLSIAKDNNDFFEMMNS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttggttgtacttgttgggtttagtgaagagaattttatgtcagaaggtgtcatggaaaag
gaagagtctatagtaaagggtggtgtcacagaaaacccctccgaaggagggagggtactg
aacctgtgtgaactgaagcaaaagagcacggaggagttactggtaacagcagaggagttg
ggagtagtcagcaacggaaggatgctgaagcaggagataattttccagctaatgaagcga
gttatcagtgaaggaggcatagctatcggaggtggagtagtagagacactacctgacggg
tttgggtttttaagatcagccaaggctaactatgcagcaagcagtgatgatatctacata
tctgcaggccagatcaagaagttcaatttaagaacaggagacatagtaagtggcgagatc
agagcacctggggagaaggagagatacttcacactggtcaaggcatatagcataaactac
acagagataggaaagctacagaggtacgtacactttgacgatctgattccactataccct
gaggagaggattttactcgaatgcaaagagagttttggaggggagaagaaagacatcagc
atgcgcgcaatagacatcatagccccactgggcaaaggtcagcgtgcactgattgtagca
ccacctagggtgggcaagacggtaattttgcagcagattgcacactccattgccatgaat
cacccaaacatggagttgatagtcctgctcataggagaacggcctgaggaagttacagac
atgctgaggtcagtaaaaggagaagtagtgagctccacatttgatgagccagcatatagg
cacgtacaactggctgaaatagtaattgagcgggctaagaggatggtagaacacaagaag
gaagttgtgatactactagactcaatcaccagattggcccgtgcgtacaatgaggtcatg
ccatcatctggtaaggtactaactggtggggtagattctaacgcattgcaaagacccaag
aggttcttcggagctgcaaggaacatcgagaatggcgggtcactcaccatcattgcaaca
gcactgattgaaactggttcaaagatggatgaagtcatctttgaagaattcaagggtaca
ggtaactgtgaaataatcctagacaggaaaatcgcagacaagagaatctaccctgcgatt
gatatttctaaatctgggactcgtaaggaagacatgctgatagagagtgcatttttgaag
aaggtatggctactcagaaggttactatcagcaatgggtccagtagaagccatggagttc
ctgcgagacaagctaagcatcgccaaggacaacaatgacttctttgagatgatgaacagc
taa
DBGET
integrated database retrieval system
