Alteromonas mediterranea DE1: amad1_00075
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Entry
amad1_00075 CDS
T02340
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa03030
DNA replication
amaa03410
Base excision repair
amaa03420
Nucleotide excision repair
amaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
amad1_00075
03410 Base excision repair
amad1_00075
03420 Nucleotide excision repair
amad1_00075
03440 Homologous recombination
amad1_00075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaa03032
]
amad1_00075
03400 DNA repair and recombination proteins [BR:
amaa03400
]
amad1_00075
Enzymes [BR:
amaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
amad1_00075
DNA replication proteins [BR:
amaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
amad1_00075
DNA repair and recombination proteins [BR:
amaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
amad1_00075
NER (nucleotide excision repair)
GGR (global genome repair) factors
amad1_00075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AFV83547
LinkDB
All DBs
Position
complement(15622..18414)
Genome browser
AA seq
930 aa
AA seq
DB search
MPDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIKQYNPTHMAV
IFDAKGKTFRDDIYKEYKANRPPMPEELRSQIAPLHTIIKAMGLPVIVESGVEADDVIGT
LAKHATEKGIDTLISTGDKDMAQLVNKHVTLINTMTNQLMDVEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDDIYKNLDKIADLSFRGSKSMAAKMEEYE
EQARLSYTLATISIDLELDYDVETLMPCQADNEQLRDLFAEYEFKRWHAEVSALLAGGDT
SSATESTSAESSDSTQTSESATSGDIDKSKYETVLDEETFNTWLGKLQKAQLIAFDTETT
SLNYMDAELVGVSFCIEEGEAAYVPVAHDYPDAPTQLSREFVLDALKPILESSNIIKVGQ
YIKYDKNVLANYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEDIAGK
GAKQLTFNQIALEEAGPYAAEDADITLRLHNIIWAKLKEIPELKNLLIDVEVPLACVLSR
MEQEGVLIDSQRLSQQSQDLAARIAELEKEVHEEAGEPFNLGSTKQLQHILFEKMSLPII
KKTPKGAPSTSEDVLQELALEYPLPKKIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAITATGRLSSTDPNLQNIPIRNEEGRRVRQAFVPRKGNKFVAADYSQIELRIMAHLSG
DKGLLDAFAHGKDIHKATASEVFGVPLDEVTTEQRRSAKAINFGLIYGMSAFGLAKQLNI
PRNEAQKYMDLYFERYPGVLEYMDSTRESAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWISKNAADDVTMMMQVHDELVFEIKEDKVDSYVK
TINTLMESAATLNVPLVVEAGVGENWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattctaaaaagccgccatttattcttgttgatggatcgtcttatctctttcgt
gcttttcacggtctaccacctttaaccaactcaaaaggtcaagacaccggcgctatttac
ggcgttgtaaatatgctcaagagcctgatcaaacaatataacccaactcacatggcggtt
atttttgacgctaaaggcaaaacctttcgcgacgatatttataaagaatataaagctaac
cgcccgcctatgccggaagagctaagaagtcagatcgcgcccttacacacgattatcaaa
gcgatgggtctaccggttattgttgagtcgggtgtggaagctgatgatgttattggtaca
ttagcaaagcacgccacagaaaaagggatcgatacacttatcagtacgggcgacaaagat
atggctcaactggtgaacaagcatgtcacactaatcaataccatgactaaccagcttatg
gatgtggaaggtgtaaatactaaattcggtatccctcctgaacttgtgatcgactttctc
gcgcttaaaggcgacaaggttgataacatcccaggcgtgccaggggttggtgataaaagc
gctcaagcactattaaacggtatcggcggtattgacgatatatataagaatttagacaag
atcgccgacctttcatttagaggcagtaagtcgatggcagctaaaatggaagagtatgaa
gaacaggcccgcctttcttacaccctcgccacgattagtatcgatctggaattggactac
gatgtcgaaacgctaatgccttgccaagccgacaatgaacaacttcgtgatctatttgcc
gaatacgagtttaagcggtggcacgctgaagtgagtgctttgttagcaggcggcgataca
tctagtgctacagaatccacaagcgcagaaagcagcgactctacgcaaacgagtgaatct
gcgacatctggcgatattgataagtctaagtatgagaccgtgctagatgaagaaacattt
aatacttggcttggcaaattgcaaaaagcacagctcattgcgtttgatactgaaacgacc
agccttaattatatggatgcagagcttgttggcgtctcattttgtattgaagaaggtgag
gctgcctatgtacctgtagcgcatgattacccagatgctccgacacagttatctcgcgag
tttgtattagatgcacttaagcctattttagaatcgagcaatatcattaaagtaggtcag
tatatcaaatacgataaaaacgtattggcaaactacgacattacgttgaacggtattggc
tttgacaccatgcttgagagttatgtgcttaacagcactgcacaacgtcacgacatggac
tcccttgctcttgcctatctcggccacaaaaccattcactttgaagacattgccggtaaa
ggggcgaagcaacttacgtttaaccaaattgctcttgaggaagctgggccgtatgctgct
gaagatgcggatattacgcttcgcttgcacaatataatatgggctaagctgaaagaaatt
ccagagcttaagaacttgttaattgatgtagaagtgccccttgcttgcgtactgtcgcga
atggagcaagaaggggtattaattgatagtcaaagattgagtcagcaaagccaagatctt
gccgcccgtatcgctgagctggaaaaagaagtccatgaagaagccggcgaaccatttaac
cttggttcaacaaagcagcttcaacatattctatttgaaaagatgtcgctgcccataata
aagaaaacgcctaaaggcgcgccatcaacgtctgaagacgtgctacaggagcttgccctt
gaatacccgcttcccaagaaaattatggaataccggggattaaccaagttgaaaaatacc
tacaccgataagcttccaaagatgatcaatcatcgaacaggccgtgtccacacatcttac
catcaggccataacagccaccggaagactctcttctaccgatccgaatttacaaaacatc
cctattcgcaacgaagaaggccgtcgtgtacgccaagcctttgttccccgtaaaggaaac
aagtttgttgctgccgattactcgcaaattgaactgcgcattatggctcatctgtcaggg
gataaaggtctgttagatgcgtttgcacatggcaaagatatacataaagccaccgcatca
gaggtatttggggtgccgcttgacgaagtaacaaccgaacagcgacgtagcgctaaggcc
attaactttggccttatttacggcatgagtgcatttgggttggctaagcaattaaatatt
ccccgtaatgaagcccagaaatacatggatctttacttcgaacgttaccctggtgtactt
gaatatatggactcaacccgcgagagtgcaaaagaaaaaggctatgttgaaacggtattt
ggccgacgtctttacctgccagatattaaagcaagcaatggtgcccgtagaaaaggcgca
gaacgcgccgctatcaatgcgcctatgcagggtacagccgcagacatcattaaaatggct
atgatcaaagtggatgactggatttcaaagaatgccgcagacgatgtcactatgatgatg
caagtgcacgatgagttagtgttcgaaataaaagaagataaagtcgatagctatgtgaag
accatcaacacgcttatggaaagcgctgcaacgcttaatgtaccgcttgttgttgaagcg
ggtgttggtgaaaactgggacgaagcgcactag
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